Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00663 ATGGCTTTATGGAGAGCTCGTACGGCTTCTTCAGTGCTCTTTAATGTCAGCAAGCATAAACTTACCCAGCAGTTTTCAGTTGTCAACAACAACATTGGCACTTCATGTCGCAACTTCTCAATTGATTTCTCGAACAGATTTTCTGGTGCTACGAAGGAGAGTATGATGAACCAAATGGCTTATATGGACATAAATTCGCAAATTGGGAGTTGCATGCCACTTGCCATGATGCGGATTGGGACAATAATTCACAACATCGAGATGAAGCCTGGACAGGGTGGCAAGCTTGTGCGAGCAGCAGGGACCAGTGCAAAGATCTTAAAAGAGCCCACGTCAAGGTACTGTTTAATCCAACTACCTTCAGGTGTTAAAAAGGAAATTGATACTCGTTGCAGGGCCACAATTGGTATAGTATCTAATCCAAGCCATGGAGATAAGAAGCTAAGAAAGGCTGGACAAAGCCGTTGGCTTGGTCGACGACCAGTGGTACGAGGAGTGGCAATGAATCCTATAGATCATCCTCATGGTGGAGGTGAGGGAAAGAGCAAGAGCAGTGGTCGATTTGGAAGGGAATCTGTCTCCCCTTGGGGCAAGCCAACCAAGTGTGGGTTCAAGACTGGGCCTCTGAAGCGCAAAAAGTAG 642 0.4642 MALWRARTASSVLFNVSKHKLTQQFSVVNNNIGTSCRNFSIDFSNRFSGATKESMMNQMAYMDINSQIGSCMPLAMMRIGTIIHNIEMKPGQGGKLVRAAGTSAKILKEPTSRYCLIQLPSGVKKEIDTRCRATIGIVSNPSHGDKKLRKAGQSRWLGRRPVVRGVAMNPIDHPHGGGEGKSKSSGRFGRESVSPWGKPTKCGFKTGPLKRKK* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00663 213 Gene3D Ribosomal protein L2, domain 3 139 213 IPR014726 -
Pte19g00663 213 Gene3D - 57 138 IPR014722 -
Pte19g00663 213 ProSitePatterns Ribosomal protein L2 signature. 161 172 IPR022671 GO:0003735|GO:0005840|GO:0006412
Pte19g00663 213 FunFam 50S ribosomal protein L2 139 213 - -
Pte19g00663 213 Pfam Ribosomal Proteins L2, C-terminal domain 68 197 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pte19g00663 213 PANTHER RIBOSOMAL PROTEIN L2 54 210 IPR002171 GO:0003735|GO:0005840|GO:0006412
Pte19g00663 213 SMART Ribosomal_L2_C_2 66 199 IPR022669 GO:0003735|GO:0005840|GO:0006412
Pte19g00663 213 MobiDBLite consensus disorder prediction 167 213 - -
Pte19g00663 213 SUPERFAMILY Translation proteins SH3-like domain 68 201 IPR008991 -
Pte19g00663 213 FunFam 60S ribosomal protein L2, mitochondrial 62 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00663 Pte-Chr19 5311234 5314157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00663 65 178 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 42.500 2.86e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00663 - - qsa:O6P43_031498 307.375