Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00662 ATGGCAAATTCAAAGGGGTCATCAAACATCAGAAATTTGATGTATCCTGGGAAGCATGCTTTACTTCCTCCTAAATGCCCATTTCCTGGTATTGCACCTACATATAATGATTACATTCAAAATCCCTTGATTGGCTCAAAACCTGTTCAGAAGCCTAGAGAAGGGAATACTTACCACCAAAGGACTTCATCTGAGAGTGTACTCATAGAGGAGCAACCGTCTTGGCTTGATGATCTCCTTAATGAGCCAGAGACACCTGTCCGAAAGGGTGGTCATCGTCGTTCATCTAGTGATTCTTTTGCATACATAGACACTGCTGTTGGTGCTAACGCTGGTTATTCAGATCAGGATGACTACATATACCGGAACATGATTGCTTCATCTTGGGCATGTCAAGAATTTGATCATCACAAAGATGCTCGACATTTTCCCTCATATGCCGAATTGAACTCAACAAAGAAAAAGAACCGGCCTTGGGAAGCCTCTTCAAATGTTAGGAATCAGTCCGGTGGTATTCCTGCTGTCAGGGGTAATAATACTCCTCCAAGTTCTGGATCATCTGGTCCACCGCAAGAGGCTGATGGCAGTCTTTCTACTGTACATGGAAAGCAAGATGCTCTTGATTCTAGTGTGCCGGATACAAGAACAACTCCTGAAAGAAAAGATGGTTCAAATGCAAAGTCAAATTCAGAGACTGAAACAAAACGCACTAAACAGCAATTTGCACAACGATCACGGGTTCGGAAGCTTCAATACATAGCAGAGCTAGAAAGAAATGTGCAGGCTTTACAGGCTGAAGGATCTGAAGTATCCGCGGAGCTTGAATTTCTAAATCAGCAGAATCTTATTCTGGGGATGGAGAATAAAGCCCTCAAGCAACGTTTAGAAAGTCTAGCTCAAGAGCAATTTATCAAATACTTGGAGCATGAAGTACTGGAGAAGGAAATTGGAAGATTGCGCGCCATGTATCAGCTGCAGCAACAGCAACAACCACCACAACATCATAAACAAAAGCAGCAGCAACCATCTTCCAGCCATAGGCGTGCTAACAGCAGAGACCTTGATTCTCAGTTTTCAAACCTTTCCTTGTAA 1092 0.4304 MANSKGSSNIRNLMYPGKHALLPPKCPFPGIAPTYNDYIQNPLIGSKPVQKPREGNTYHQRTSSESVLIEEQPSWLDDLLNEPETPVRKGGHRRSSSDSFAYIDTAVGANAGYSDQDDYIYRNMIASSWACQEFDHHKDARHFPSYAELNSTKKKNRPWEASSNVRNQSGGIPAVRGNNTPPSSGSSGPPQEADGSLSTVHGKQDALDSSVPDTRTTPERKDGSNAKSNSETETKRTKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAELEFLNQQNLILGMENKALKQRLESLAQEQFIKYLEHEVLEKEIGRLRAMYQLQQQQQPPQHHKQKQQQPSSSHRRANSRDLDSQFSNLSL* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00662 363 Gene3D - 232 285 - -
Pte19g00662 363 MobiDBLite consensus disorder prediction 214 240 - -
Pte19g00662 363 MobiDBLite consensus disorder prediction 149 246 - -
Pte19g00662 363 MobiDBLite consensus disorder prediction 325 347 - -
Pte19g00662 363 SUPERFAMILY Leucine zipper domain 242 284 IPR046347 GO:0003700|GO:0006355
Pte19g00662 363 SMART brlzneu 231 290 IPR004827 GO:0003700|GO:0006355
Pte19g00662 363 Coils Coil 246 280 - -
Pte19g00662 363 CDD bZIP_plant_RF2 234 281 IPR044759 GO:0003700|GO:0006355
Pte19g00662 363 MobiDBLite consensus disorder prediction 325 363 - -
Pte19g00662 363 Coils Coil 309 329 - -
Pte19g00662 363 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 9 363 IPR044797 -
Pte19g00662 363 MobiDBLite consensus disorder prediction 149 213 - -
Pte19g00662 363 MobiDBLite consensus disorder prediction 46 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00662 Pte-Chr19 5302538 5308511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00662 70 305 bZIP Transcription Factor Family AT3G58120 31.008 4.38e-21 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00662 - - mnt:21390374 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00662 19 5302538 5308511 Pte19g00662 19 5302538 5308511 RCT