Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00659 ATGGCCTCCCACACACGCATTCTGCGTATTGGCTACTCAAACGAGATTCCAGATGGACAATCAATCTTTGTGTCTTCAAACTGTCTCCCTGTCAAGGCTTTCAACTTGGAACCTGCGGGACACTCATTCCATTCTGCTGCACTTAGATTTCTCGGTTTTGAAGAAGATAGTGATGATAAAGATGATAGAAAGGTCCCTGACAGTAAGGAGCAATCATATTTTCCATCTTCAGATTCTTACAGTAGCAAGGGTAAAAAGAAATCTGGCGATAAGCAACAAGATCACTATGCACTATTGGGTTTGAGTCATCTGAGGTATCTTGCTACAGAGGAGCAGATTCGGAAAAGCTACCGAGAGACTGCCTTAAAGCATCATCCAGACAAACAAGCTGCTATTCTTTTAGCTGAGGAAACTGAAGCTGCAAAACAGGCCAAAATGGATGAAATAGAAAGTCACTTCAAGTCAATACAGGAAGCATACGAGGTTTTGATTGATCCTGTGAGGAGAAGACTGTATGATTCTACGGATGAGTTTGATGATGGGATCCCGGTTGACTGTGCCCCGCAGGACTTCTTTAAGGTTTTTGGTCCTGTTTTTATGAGAAATGGGCGGTGGTCAGTTAATCAGCCTGTTCCATCTTTAGGTGATGATAATACAGCAATGAAAGAAGTTGATAATTTCTATAATTTTTGGTACTACTTTAAAAGTTGGAGAGAGTTTCCACATGCTGATGAATACGATCTTGAGCAAGCTGAATCTCGGGACCATAGGAGATGGATGGAAAGGCAAAATGCAAAGCTTTCAGAAAGAGCTAGGAAGGATGAATACACAAGAGTGCGTTCGCTTGTTGACAATGCATATAAACGGGATCCACGGGTATTGAGGAGAAAGGAAGAGGAAAAAGCTGAGAAGAAAAGAAAAAAGGAGGCCAAGTATCTGGCTAAGAGACTGCAGGAGGAAGAAGCTGCTCGAATTGCTGAAGAGGAGAAGCGCATGAAGGAGGAGGAGGAAAAACGGGCTGCAGAAGATGCTTTGCATCAGAGAAAGGAGAAGGAAAAAGAGAAGAAGCTTTTGCGGAAAGAGCGCAATCGCCTTCGATCACTTTCAGCTCCTATTGTAACTCAACTTATGCTTGGCCTTTCTAAAGATGATGTTGAAAATATTTGCATGTCATTTAATTTAGAGTGTTTGAGGAGGTTGTGTGATATGATGGAGGGTAAAGACACATCAGAACAAGCAAAAGTCCTTAAAGATGCTTGTGGAAATAAAGAAGAATCTGATAACAAAGATGAGAAAGTTAATCATCTACAGAATGGCTCTGTGATATATAATGGTAGTCCTCATTTAACTGGGTCTTCTGAGAAGAAGGAGAAGCCATGGAGTAAAGAGGAGATTGATCTCTTGAAAAAAGGAATGCAGAAATATCCAAAAGGAACTTCACGGAGATGGGAGGTTATTTCAGAATACATTGGTACTGGAAGAACTGTAGAAGAAACCTTGAAGGCGACAAAGACTGTTCTCCTTCAGAAACCTGACTCTACAAAAGCATTTGATGCATTTCTTGAGAAAAGGAAACCAACTCAGTCCATAGCATCGCCACTTTCAACTAGGGAGGACATTGAAGGATCATCTTCTCTAGTCTCTGAGAATGGTTCTGCTGTCAGTACAGATGACTTGGGAAACTCTTCTGTAAAAGGTGGAAGCAACCATAATTCCATGGAATCAGTTACTATTGCGAATGGAGGTTCTTCAGGCAGTTCAGACCAAGATGTATGGTCGCCAGTGCAAGAGAAGGCATTAATACAGGCTTTGAAAGCTTTCCCCAAGGAAACAAATCAGCGATGGGAAAGAGTTGCAGCTGCAGTACCTGGGAAAACTGTGAACCAGTGTAAGAAAAAATTTGCATCTTTGAAGGAGAACTTCAGGAACAAGAAAAACGCTGTTTAG 1947 0.4165 MASHTRILRIGYSNEIPDGQSIFVSSNCLPVKAFNLEPAGHSFHSAALRFLGFEEDSDDKDDRKVPDSKEQSYFPSSDSYSSKGKKKSGDKQQDHYALLGLSHLRYLATEEQIRKSYRETALKHHPDKQAAILLAEETEAAKQAKMDEIESHFKSIQEAYEVLIDPVRRRLYDSTDEFDDGIPVDCAPQDFFKVFGPVFMRNGRWSVNQPVPSLGDDNTAMKEVDNFYNFWYYFKSWREFPHADEYDLEQAESRDHRRWMERQNAKLSERARKDEYTRVRSLVDNAYKRDPRVLRRKEEEKAEKKRKKEAKYLAKRLQEEEAARIAEEEKRMKEEEEKRAAEDALHQRKEKEKEKKLLRKERNRLRSLSAPIVTQLMLGLSKDDVENICMSFNLECLRRLCDMMEGKDTSEQAKVLKDACGNKEESDNKDEKVNHLQNGSVIYNGSPHLTGSSEKKEKPWSKEEIDLLKKGMQKYPKGTSRRWEVISEYIGTGRTVEETLKATKTVLLQKPDSTKAFDAFLEKRKPTQSIASPLSTREDIEGSSSLVSENGSAVSTDDLGNSSVKGGSNHNSMESVTIANGGSSGSSDQDVWSPVQEKALIQALKAFPKETNQRWERVAAAVPGKTVNQCKKKFASLKENFRNKKNAV* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00659 648 SUPERFAMILY Homeodomain-like 458 499 IPR009057 -
Pte19g00659 648 Gene3D - 451 510 - -
Pte19g00659 648 MobiDBLite consensus disorder prediction 528 591 - -
Pte19g00659 648 PRINTS DnaJ domain signature 148 168 IPR001623 -
Pte19g00659 648 PRINTS DnaJ domain signature 117 132 IPR001623 -
Pte19g00659 648 PRINTS DnaJ domain signature 99 117 IPR001623 -
Pte19g00659 648 Pfam DnaJ domain 94 173 IPR001623 -
Pte19g00659 648 FunFam Myb family transcription factor 586 646 - -
Pte19g00659 648 SMART dnaj_3 93 168 IPR001623 -
Pte19g00659 648 MobiDBLite consensus disorder prediction 435 450 - -
Pte19g00659 648 Gene3D DnaJ domain 77 181 IPR036869 -
Pte19g00659 648 CDD SANT 592 638 IPR001005 -
Pte19g00659 648 SMART sant 456 509 IPR001005 -
Pte19g00659 648 SMART sant 588 640 IPR001005 -
Pte19g00659 648 ProSitePatterns Nt-dnaJ domain signature. 153 172 IPR018253 -
Pte19g00659 648 SUPERFAMILY Homeodomain-like 588 638 IPR009057 -
Pte19g00659 648 Coils Coil 300 368 - -
Pte19g00659 648 CDD DnaJ 94 165 IPR001623 -
Pte19g00659 648 SUPERFAMILY Chaperone J-domain 60 172 IPR036869 -
Pte19g00659 648 Pfam Myb-like DNA-binding domain 591 637 IPR001005 -
Pte19g00659 648 Pfam Myb-like DNA-binding domain 458 497 IPR001005 -
Pte19g00659 648 ProSiteProfiles Myb-like domain profile. 592 638 IPR001005 -
Pte19g00659 648 MobiDBLite consensus disorder prediction 328 354 - -
Pte19g00659 648 MobiDBLite consensus disorder prediction 423 461 - -
Pte19g00659 648 CDD SANT 459 498 IPR001005 -
Pte19g00659 648 ProSiteProfiles Myb-like domain profile. 452 495 IPR001005 -
Pte19g00659 648 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 10 647 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Pte19g00659 648 ProSiteProfiles SANT domain profile. 587 642 IPR017884 -
Pte19g00659 648 ProSiteProfiles dnaJ domain profile. 94 176 IPR001623 -
Pte19g00659 648 Gene3D - 582 648 - -
Pte19g00659 648 MobiDBLite consensus disorder prediction 56 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00659 Pte-Chr19 5287705 5291487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00659 95 294 C2H2 Transcription Factor Family AT1G74250 29.289 9.38e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte19g00659 DnaJ 4.8e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00659 K09522 - jre:109002309 847.425