Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00652 ATGGACGGTCCTCCAATGGATGATTGCTGCCCAGTCTGTCATGGCGAATTCACTCTTCCATGCCGGACCTCTTGTTCGCACTGGTTCTGTGGAGACTGCATTTTGCGAGTATGGCTATTTGGGGATGCAATGAAGCGATGCAGGTGCCCTATATGTACTTCTTCTTTCTCTACTTTGACTCCCCTCCAAGAATCATTTGACTGTAGTCAAGACCCCGAAGCTACCAAAATTATGAAAGATGTCAAGAGGTATAATAGGCTGCACGTTGGGGGCGTCAAGGGTTTCTTTCAGAAAGGATTGGAGCTTCGTTTTTTAATTTGGATGACTTTGCAAGATATGATGGATCCTGATAGAGCTGCCAGAAGCCTATTCAGGGCACGTAGATTTGCACTTGTGGCGGGCTCGTTCTTTGCACTCTTCCCATTTGAGCTTAATCCTACAGTGAGACGCATTACCGTGAACTTCTTTGACATTGGCTGGATTGTACTTGTGGCTACCACGTATTTGATTGGACTCTACCGCAGAAGACGTATGCAGAGGCAACAACTTGGTATAGATGTGCTGCTTGAGCGATCCCAGGATGTGCCCGTACATGTCCAGTAG 603 0.471 MDGPPMDDCCPVCHGEFTLPCRTSCSHWFCGDCILRVWLFGDAMKRCRCPICTSSFSTLTPLQESFDCSQDPEATKIMKDVKRYNRLHVGGVKGFFQKGLELRFLIWMTLQDMMDPDRAARSLFRARRFALVAGSFFALFPFELNPTVRRITVNFFDIGWIVLVATTYLIGLYRRRRMQRQQLGIDVLLERSQDVPVHVQ* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00652 200 PANTHER UNCHARACTERIZED 2 182 IPR038896 GO:0061630
Pte19g00652 200 Pfam Zinc finger, C3HC4 type (RING finger) 10 52 IPR018957 GO:0046872
Pte19g00652 200 SMART ring_2 10 52 IPR001841 -
Pte19g00652 200 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
Pte19g00652 200 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Pte19g00652 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 88 IPR013083 -
Pte19g00652 200 SUPERFAMILY RING/U-box 7 62 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00652 2 131 C3H Transcription Factor Family AT4G33940 42.308 3.83e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00652 K15707 K24166 cave:132168217 229.95