Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00635 ATGAGACGAAGACTAGAAGAAAACCTTCGACGTCGGGTGGAGCGCCACATGTCTGCGTGCCCAACCATTGATGATATGGTTTCATATCTTCACTCAGAATTTCCTGAATATTGTAGAATGAAGAAGCAAACACTAACCACTTTAGTCCGACAGGCCATGGAATCACCTCAAAGTGGTATTACCAAGAGGAATAGAAATAAACACTCTAGGTCTCCGCTCAGGTTTGAACCTGGGAGTGATGAAGATGGAGATTTTGATAAAGAATTGGGAGGAAGTCTGCCACGTAAGAAGTCAAGAAAAAACGATGAGGGCGAAGAGAAATTGCAACGTTTAGAGAATTCTCACCTTCGAAGAATAGAGAGTAATTTTTTTGACAATTCTTCATCTTCATCTGGGTCTGAGTCAGAAGGTGATGATGTCAATGGGGCACTTTCAACATCAGAGGATGCAGTTTATTGTCAGGAAGTGAAACCAGAGATTGATTTGATGAAGTCAATGTTGATATCGAATTATAAGAAAGGAACATCAAAAAAGAGTAGGGAACTGGAGGTGGCTAATGACAATAAGGGTAGTAAGGCTGGATTAGTGGATTTGAATAGAGGTGAGAGAAGGTTGGGGTCAGAGATGAAGAAAGAAGCAAAGGGTTCTGTTTCCAATGAAAGTAGTGGTGATGACATGAAGGGAATAGATGATGGACCAAGATTTAAAGATTTGGGTGGGATAAAGCATGTATTGGAGGAATTGATGATGGAGGTGATCGTGCCCTTGTGTCATCCACAGTTGCCGAGGTGGTTGGGAGTTAGACCAATGGCAGGGATTTTGTTACACGGTCCACCTGGTTGTGGGAAGACTAAACTAGCTCATGCAATAGCCAATGAGACTGGCGTTCCATTTTATAAGATTCAAGCTACCGAGGTTGTCTCTGGTGTCTCAGGTGCTTCTGAAGAGAATATCAGAGAACTTTTTGCTAAAGCATACAGGACTGCCCCTTCTATTGTTTTTATTGATGAAATTGATGCAATTGCATCTAAAAGAGAAAATTTGCAAAGGGAAATGGAAAAGAGAATTGTGACACAGTTGATGACATGCATGGATGAATCTTATAGAACTTCTGAAATGGATGATAAGCAGCTACATTCTGAAAATTCAGATAAAAATCTGGGATATGTGCTTGTCATTGGAGCCACAAATAGGCCTGATTCTGTTGATTCTGCTCTCCGAAGGCCAGGACGGTTTGATCGTGAGATTGTTCTTGGTGTTCCAGATGAAAATGCTAGATCAGAAATTCTTTCTGTGCTGACACGTTATCTTAGGCTTGAGGGTTCATTTGATCTTCTCAAAATAGCAAAGTCAACTTCTGGTTTTGTTGGAGCTGATTTGACAGCTCTGGTTAATAAGTCTGGTAATCTGGCGATGAAGAGAATTATTGACGAAAGAAAGGGTAAGTTGTCCCAAGAATCCAATGAAGAGTGGTGGAGAAAACCTTGGTCACTTGAAGAGATGGATAATCTTGCGATAAAGATGTCTGATTTTGAGGATGCTGTCAAATTGGTTCAGCCATCACTAAGAAGAGAAGGATTCTCTTCCATTCCTACAGTAAAGTGGGAAGATGTTGGTGGACTGGATCATCTGCGTCAGGAATTTGAACGTTATATAGTTAGGCGTATAAAATATTCTGAGTTGTACAAGGTAACTTAA 1698 0.4075 MRRRLEENLRRRVERHMSACPTIDDMVSYLHSEFPEYCRMKKQTLTTLVRQAMESPQSGITKRNRNKHSRSPLRFEPGSDEDGDFDKELGGSLPRKKSRKNDEGEEKLQRLENSHLRRIESNFFDNSSSSSGSESEGDDVNGALSTSEDAVYCQEVKPEIDLMKSMLISNYKKGTSKKSRELEVANDNKGSKAGLVDLNRGERRLGSEMKKEAKGSVSNESSGDDMKGIDDGPRFKDLGGIKHVLEELMMEVIVPLCHPQLPRWLGVRPMAGILLHGPPGCGKTKLAHAIANETGVPFYKIQATEVVSGVSGASEENIRELFAKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLMTCMDESYRTSEMDDKQLHSENSDKNLGYVLVIGATNRPDSVDSALRRPGRFDREIVLGVPDENARSEILSVLTRYLRLEGSFDLLKIAKSTSGFVGADLTALVNKSGNLAMKRIIDERKGKLSQESNEEWWRKPWSLEEMDNLAIKMSDFEDAVKLVQPSLRREGFSSIPTVKWEDVGGLDHLRQEFERYIVRRIKYSELYKVT* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00635 565 Pfam ATPase family associated with various cellular activities (AAA) 273 418 IPR003959 GO:0005524|GO:0016887
Pte19g00635 565 Gene3D - 421 525 - -
Pte19g00635 565 Gene3D - 228 419 IPR027417 -
Pte19g00635 565 MobiDBLite consensus disorder prediction 70 119 - -
Pte19g00635 565 FunFam Cell division control protein 48 homolog C 421 525 - -
Pte19g00635 565 PANTHER AAA-FAMILY ATPASE 122 563 - -
Pte19g00635 565 FunFam Ribosome biogenesis ATPase RIX7 224 419 - -
Pte19g00635 565 ProSitePatterns AAA-protein family signature. 390 408 IPR003960 GO:0005524|GO:0016887
Pte19g00635 565 SMART AAA_5 269 422 IPR003593 GO:0016887
Pte19g00635 565 Pfam AAA+ lid domain 443 478 IPR041569 -
Pte19g00635 565 MobiDBLite consensus disorder prediction 52 143 - -
Pte19g00635 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 234 525 IPR027417 -
Pte19g00635 565 MobiDBLite consensus disorder prediction 120 142 - -
Pte19g00635 565 MobiDBLite consensus disorder prediction 201 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00635 Pte-Chr19 5005294 5007853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00635 265 563 Calmodulin-binding Proteins AT3G56690 31.461 2.73e-50 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00635 K14571 - qsa:O6P43_012227 648.662