Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00621 ATGGATCAGATCTCACTAAGTTCAAGCTTAAGCAGCTTCAGGCCATTCATGTCTAGTTCAGTCTCAAGTAGACGGCCACAAGTGACTCAACTGAGAGTAGCTGTTTCATGTAGAGCTTCAGCAACTCAAAGTGCATACACGATTCAAGAGATGAACACTAATTTCTACAATGTCTTGGCATTGAGTCCCAAAAATTCTACAGCTGATGATATAAAAAAGGCTTACAGATCAATGGCTCTCAAGTATCATCCTGATGTTTGTCATCCTTCAATGAAAGAAGAGTCTACCAAGATGTTTGTTCAGCTTAATGAAGCTTACAAGACACTGTCAAATCCTTCTCTTCGTCAAGAGTATGATTGTGAATTAGGTCTGAAAGACAATATGATGAGTGTTTTTAGTTCCAGAGAGGATCATGAGATGAGGCTATGGCAGGAAGAGGAGGTAGCTGAGTTGAAGAGAAGGACTGATTCTCGTATGGAAAGGAAGAAAGGGTCATCTGGCACTAGAATGAGGAGTAGGAACAAAGGGAGAGATTAA 537 0.406 MDQISLSSSLSSFRPFMSSSVSSRRPQVTQLRVAVSCRASATQSAYTIQEMNTNFYNVLALSPKNSTADDIKKAYRSMALKYHPDVCHPSMKEESTKMFVQLNEAYKTLSNPSLRQEYDCELGLKDNMMSVFSSREDHEMRLWQEEEVAELKRRTDSRMERKKGSSGTRMRSRNKGRD* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00621 178 SMART dnaj_3 53 114 IPR001623 -
Pte19g00621 178 Gene3D DnaJ domain 40 148 IPR036869 -
Pte19g00621 178 ProSiteProfiles dnaJ domain profile. 54 122 IPR001623 -
Pte19g00621 178 PRINTS DnaJ domain signature 94 114 IPR001623 -
Pte19g00621 178 PRINTS DnaJ domain signature 75 90 IPR001623 -
Pte19g00621 178 PRINTS DnaJ domain signature 57 75 IPR001623 -
Pte19g00621 178 MobiDBLite consensus disorder prediction 149 178 - -
Pte19g00621 178 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 15 175 - -
Pte19g00621 178 SUPERFAMILY Chaperone J-domain 13 118 IPR036869 -
Pte19g00621 178 CDD DnaJ 54 111 IPR001623 -
Pte19g00621 178 Pfam DnaJ domain 54 119 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00621 Pte-Chr19 4931757 4932692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00621 56 119 C2H2 Transcription Factor Family AT1G74250 40.299 3.64e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00621 - - gmx:100811478 150.214