Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00617 ATGGAGAAAGTGAACGAGTTGTCCATCCTTTGTGCCGTCAGTGCATGTCTCATCATCTTCTGGGCTGAGCAACTCGAGCCCATCATGTGGCCATCTCCTGAAGTGGCGAAAGAACTGCTTCAACGGTTTCTCGATCTACCAGACATGAAAAAGTACTCAAAGATGGTGGATCAAGAAACTTATTTACGTGACAAGTTGAGGAAGATGGAGATAAAGATAAAAAGGCAGTCTCGATTGAACCCGATTTCCAGAGATTGA 258 0.4457 MEKVNELSILCAVSACLIIFWAEQLEPIMWPSPEVAKELLQRFLDLPDMKKYSKMVDQETYLRDKLRKMEIKIKRQSRLNPISRD* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00617 85 Gene3D - 1 69 IPR036879 GO:0003677|GO:0046983
Pte19g00617 85 SUPERFAMILY SRF-like 1 67 IPR036879 GO:0003677|GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00617 9 78 MADS-box Gene Family AT2G15660 44.286 1.29e-15 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Pte19g00617 SRF-TF 0.00019 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00617 - - thj:104827443 84.7297