Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00598 ATGGCGAACAAGAGTGTCGGAGCACACACCGGAGAGTTCTTCAGGAGAAGGGACGAGTGGAGGAAACATCCGATGTTGACAAATCAGCTGAAACATGCGACTCCTGGTCTTGGCATAGCTCTTGTTGCATTTGGGATCTACCTCGTTGGTGAACAAGTCTACAACAAACTCAATGCTTCTTCTCACCACAATTCTCACTCTTCTGCTTCCTCTGAATATTGTATCTATCATCCAAATTACGTTCCTGTCCATGCCCCAACATATCTGTCTGCAATCTCTTCTGGTTCGTCACCGCCCAGAGCTTCTGCTGAGTTCTCGAACGTTAAGAAATCAGCTGCCATTGATTATGATAGTTTCAGCAGTACATTCTTGGCTCTCGGTTCCAAACAACAACTGGAGATGGTGAATGAAGATCAAGCAACGGTGATTGAACTTGTTAGAAGAACAACAGAATACTATCAATCAGGATCTTCAAGAAATAGAGAAGCTAATCCACTGCAAATATTTGGGATAGTCAAGGAATTCCTTGGAATGGTAGACAAAACATGCATTGAGATTGCGCGTAATATGCAGAAGAGGAAGACATCATTGGCATCATCATCACCTCAAGCGCCAGCAGCAAGGGGACCAGTCAAGTTTCCGAACCTGCGGGGACGTTTTATGTTAGATAATTCTGAATGCTCATCAAGCGACTCAAATGGTGCTTCTTAA 711 0.4402 MANKSVGAHTGEFFRRRDEWRKHPMLTNQLKHATPGLGIALVAFGIYLVGEQVYNKLNASSHHNSHSSASSEYCIYHPNYVPVHAPTYLSAISSGSSPPRASAEFSNVKKSAAIDYDSFSSTFLALGSKQQLEMVNEDQATVIELVRRTTEYYQSGSSRNREANPLQIFGIVKEFLGMVDKTCIEIARNMQKRKTSLASSSPQAPAARGPVKFPNLRGRFMLDNSECSSSDSNGAS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00598 236 SUPERFAMILY Formin homology 2 domain (FH2 domain) 103 197 - -
Pte19g00598 236 Pfam NADH-ubiquinone oxidoreductase B12 subunit family 16 63 IPR012576 GO:0005739|GO:0022900
Pte19g00598 236 Gene3D Formin, FH2 domain 97 207 IPR042201 -
Pte19g00598 236 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNIT 3 66 IPR012576 GO:0005739|GO:0022900
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00598 Pte-Chr19 4719488 4720917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00598 102 233 FH2 protein (formin) Gene Family AT1G70140 36.747 2.66e-24 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00598 - - rcu:8270368 139.428