Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00571 ATGTATCAACCCCCAAGTTCCGGTCTAGGCAGTGGAAACTCATTAGTACATGGTCAATGTCTGAATTTTAGTGGGGCATCTGGTGGCTCAATGGATTCCCTGAATGGAGGAAACAATCTGAACAACAATCCTAATCTTGCATCAAAGCAGCGGCTGCGTTGGACGCATGAGCTTCATGAACGCTTTGTTGATGCTGTGTCTCAACTTGGGGGTCCAGATCGTGCAACGCCCAAAGGGGTTCTCAGAGTAATGGGTGTCCAGGGGTTGACAATATACCATGTAAAAAGCCACTTACAGAAGTATCGACTCGCAAAATACCTCCCGGACTCCTCATCTGAAGGGAAAAAGACTGACAAGAAAGACACAGGGGATGTCCTTTCCGATCTAGGTGGTTCATCTGGAATGCAAATCACTGAAGCACTCAAGCTGCAGATGGAGGTGCAGAAGCGACTGCATGAGCAATTAGAGGTTCAGAGACAACTGCAATTAAGAATAGAAGCTCAAGGTAAGTACTTGAAGAAGATCATTGAAGAGCAACAACGACTTGGTGGAGTTATGTCCGAAGTCCCTGGCTGTGCAGTTGCAGCGTCAGTGCCTCTGGATCCTGACAAAACTTATCCTACAACTCCAGCTCCAACTTCTGAATATCCTATTCAGGATAAAGCTGCTAAAGAACGTGCGACAGCGAAGAGCATGTCAATTGATGAGTCTTTCTCACCTCACAATGAACCATTGACCCCAGATTCTGGTTGTCATGCTATTCCCCATACCAGCAGCCACCAAGGGAATATATCAACAAAGAGGCAAAAGGTGAGAATCGATGGAGCATATGCTAAGCCAGAGATTGTTCTCCCAAATCAGATACTGGAATCAAGCTTCAACTCATCATATCAGCAAATGCACCCCGCTTTCCTGATTGCAGATCGTTTTGATCCTGCATCAGGTTTATCTATGAGAAGGGAAGGTCAATTGTAG 975 0.4585 MYQPPSSGLGSGNSLVHGQCLNFSGASGGSMDSLNGGNNLNNNPNLASKQRLRWTHELHERFVDAVSQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSEGKKTDKKDTGDVLSDLGGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLGGVMSEVPGCAVAASVPLDPDKTYPTTPAPTSEYPIQDKAAKERATAKSMSIDESFSPHNEPLTPDSGCHAIPHTSSHQGNISTKRQKVRIDGAYAKPEIVLPNQILESSFNSSYQQMHPAFLIADRFDPASGLSMRREGQL* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00571 324 MobiDBLite consensus disorder prediction 109 125 - -
Pte19g00571 324 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Pte19g00571 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Pte19g00571 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 46 304 IPR044848 GO:0003700
Pte19g00571 324 MobiDBLite consensus disorder prediction 108 131 - -
Pte19g00571 324 SUPERFAMILY Homeodomain-like 48 103 IPR009057 -
Pte19g00571 324 Gene3D - 48 107 - -
Pte19g00571 324 FunFam Myb family transcription factor 48 106 - -
Pte19g00571 324 NCBIfam myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Pte19g00571 324 Coils Coil 138 158 - -
Pte19g00571 324 Pfam MYB-CC type transfactor, LHEQLE motif 135 181 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00571 Pte-Chr19 4523094 4525362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00571 84 299 G2-like Transcription Factor Family AT2G01060 67.742 8.69e-91 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte19g00571 Myb_DNA-binding 3.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00571 - - tcc:18597377 400.208