Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00570 ATGTTTCCGAGATTAATGCAAACCCATGAAGAGAGAGTTGGTCAAGAGCCTATGCAATGTGGTCCGAACCTCAGTAATAGAGGAGACCCTTGCCTTGTTTTGACTTCTGACCCCAAACCTCGTCTTCGATGGACTGCTGATCTTCACGAACGATTTGTCGACGCTGTTACTCAGCTTGGTGGTTCCAGTAAGGCTACACCTAAAGCCATCATGCGAACTATGAATGTTAAAGGATTGACTCTCTTTCATCTGAAGAGTCATCTTCAGAAATATCGACTTGGCAAGCAATCTGGAAAGGATATGACTGAAGGATGCCAGGACGCCTCCTACCTTCTTGAAAGTCCCACTACATCGCCAAAGTTGGCAACTTCTGATGTTAATGAGGGTCATGAAGTCAAGGAGGCATTAAGAGCACACATGGAAGTCCAAAGTAAATTACATTTGCAAGTTGAGGCTGAGAGGCACTTGCAGATTCGCCAGGAGGCAGAGAGAAGATACATGGCCATACTGGACAAAGCTTGTAAGGTGCTGGCTGATCAGTTTTTGGGTGCTGCAATTATCGATACTAACAGCCAAAAGCCTCAGGAACAGGAGAGTAAAACCCCAAGAACTCCTTTGCTCGATCAACTTGGCTTCTTTACATTACATTCTCCTGAGGTACCAGTAGCGCATGGTCTGGAAGAAGAGCTGCTGCAAAACCTCCAGCATCAAAGAGCTGACTGTTCATCTGAAAGCTGCCTAACATCACATGAGAGTTCTGGGGGGTTGACACTAGTAGGATCCCCATGTGTGAGGAAGAAAGGAATGGTGAGCTTGGACTCGATTACTGCACCATTTTTATGGGGTGAAGCTAAGGTAAGAAGTCATGACATTAATGGGGTGCAAGATGGCCATCAAGATGTGGAAACAACTAAGCAATCTGTAACTAACAAACAACACTGGTTTGGTGTTGTGGATTCCAAATTCCATCAAGACTTATCACTATTAACAATGGTCAAGGAATTCAATGGGTACCTAGTATTGCAACAAGGCACAAGTTTTGAAGCTGACACCAATCAAAAGGAGATAGTCCAAACAGAGACTGTTATATTATGA 1095 0.4429 MFPRLMQTHEERVGQEPMQCGPNLSNRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGSSKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMTEGCQDASYLLESPTTSPKLATSDVNEGHEVKEALRAHMEVQSKLHLQVEAERHLQIRQEAERRYMAILDKACKVLADQFLGAAIIDTNSQKPQEQESKTPRTPLLDQLGFFTLHSPEVPVAHGLEEELLQNLQHQRADCSSESCLTSHESSGGLTLVGSPCVRKKGMVSLDSITAPFLWGEAKVRSHDINGVQDGHQDVETTKQSVTNKQHWFGVVDSKFHQDLSLLTMVKEFNGYLVLQQGTSFEADTNQKEIVQTETVIL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00570 364 FunFam Myb family transcription factor 38 96 - -
Pte19g00570 364 Pfam Myb-like DNA-binding domain 42 92 IPR001005 -
Pte19g00570 364 Pfam MYB-CC type transfactor, LHEQLE motif 131 175 IPR025756 -
Pte19g00570 364 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 282 IPR044848 GO:0003700
Pte19g00570 364 Gene3D - 38 96 - -
Pte19g00570 364 NCBIfam myb-like DNA-binding domain, SHAQKYF class 39 94 IPR006447 GO:0003677
Pte19g00570 364 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Pte19g00570 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 36 96 IPR017930 -
Pte19g00570 364 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00570 Pte-Chr19 4514696 4518758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00570 21 253 G2-like Transcription Factor Family AT3G24120 49.206 2.05e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pte19g00570 Myb_DNA-binding 3.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00570 - - gmx:100782369 402.519