Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00554 ATGTCGGCAACGTTGACCAGCAACGTGCAGGCCTTGCAGTACAAAGAGGAAGAAGAAAGTAGCTCAGTTACTACTGGCCTATCTCAGAATCAGAACAATCATCACTTGTATGGCACTGGCAATACCAGCTACCCCCGTAGTCCTGTAAGTGAGATAGCGGAAGAGGAATGCAATGAAACTTTCAAGACTAGAACCAATAAGCCTATGGTTTCTATCAATGAAGAGTATGAAGGTAGCGTGTACTCACACAGTAATGCCGGTGGAGAAGATAATACTGTTTATGTAGCAATTGGCAGGGGTGAATCAAGCATGAAAGCCCTGAAATGGACATTGAACAACATTGTTACAAGTTCCACTATCACGGTGTATCTAGTTCATGTTTTTCCAGAGATTAAGCTCATTCCTAGTCCATTGGGAAGGCTTCCAAAGGATCAAGTGAGTGCACAGCAAGTTGAAAGCTACATGAACCAAGAAAGAGACAAGAGGAGAGAGCTCCTCCAAAGTTTCATGAATGCATGCCATGCTTCAAAGGCTAAGGTGGATACCATCCTCATAGAGAGTGACTTCATAGCAAAGGCGATCCTTGACCTTGTTCCTATTCTTCAAATAACAAAGTTAGTAATCGGAGCTAGCAAATCTACATTAAGGAAGTTGAAATCAAGGAGAGGAAATGGGACAGTTGAGCAGATACTACGGAATGCACCAGAAATTTGTGAAGTGAAAGTAATATGCGAAGGGAAGGAAGTGTTAGAGCTGATGAATGAGTCTCCTTGTCCAATGGCCAATGATACTCGTGATGTCAAATTTTCAAAAGATGAAGCTCAGATAAATAACCCCTTCTCATGTATGTGCTTTAAGCCTAAATGA 867 0.4198 MSATLTSNVQALQYKEEEESSSVTTGLSQNQNNHHLYGTGNTSYPRSPVSEIAEEECNETFKTRTNKPMVSINEEYEGSVYSHSNAGGEDNTVYVAIGRGESSMKALKWTLNNIVTSSTITVYLVHVFPEIKLIPSPLGRLPKDQVSAQQVESYMNQERDKRRELLQSFMNACHASKAKVDTILIESDFIAKAILDLVPILQITKLVIGASKSTLRKLKSRRGNGTVEQILRNAPEICEVKVICEGKEVLELMNESPCPMANDTRDVKFSKDEAQINNPFSCMCFKPK* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00554 288 MobiDBLite consensus disorder prediction 1 45 - -
Pte19g00554 288 Gene3D HUPs 84 248 IPR014729 -
Pte19g00554 288 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 92 240 - -
Pte19g00554 288 Pfam Universal stress protein family 92 235 IPR006016 -
Pte19g00554 288 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 44 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00554 Pte-Chr19 4381640 4383301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00554 96 247 Plant U-box Gene Family AT5G57035 35.065 1.57e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00554 - - cave:132171111 277.33