Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00532 ATGCGAACCTCACAAAAGCACCAAACATCTGCCAGTATATCTGGGTTGTTTCACCATCCTTCGCAAGATATTGACTACTACCAGTTATCTCAATTTCAAATTCTGGAAAATAATGTATCTACAGATTTCAGCAACCTCAGAACAAATTTTGCTTTGGAAACATGCAAGGAACAGTACTTCACTCTAGAGTCATCTTCAGCAACTCCTGGACCCAGTGGTTGTAATTCCCCTTCTGGTGCAAGTGTCTCATCCAGGAGGGATCCATTTTCGCCTCAAGTTTCTCAGTTATGCTTATCAGATCCGCATCATTCCTCTGATAACGCTTATGGATCACCAATGAGTGGATCCTCAAGCGCTGACGACAGCAATGAATTGAAGCATAAACTAAAGGAACTGGAGATTTCACTACTGGGGCCAGAAATGAATATTGTTGACAGTTGTTATTGCTGCTTCAAAAGTGGTTCGTGCCAAGGTACATCCCATTGGGATGAAAATAATGAAATTAAGGCAATGATACCCAAGTTAGACTTAAAACATGTGCTCATTGCCTGTGCTCAAGCAGTTGATGATGCAGATACGTCAACAGCATTGGACTTGATGGAAATGTTGGGACAGATGGTGTCAGTTTCTGGAGATCCAATGCAGCGCTTAGGCGCTTACATGCTAGAAGGTCTAAGAGCAAGGTTAGAATCATCAGGGAGTTCAATCTACAAAGCCCTGAAATGTGAAGAACCAACTAGCTCAGAATTGATGAGTTATATGCATATCCTCTTCCAGATTTGCCCGTATTGGAAGTTTGCTTACGCATCTGCAAATGCTGTCATCTTACAAGCAATGGCCAACGAGTCCAGAATTCATATTATTGATTTCCAGGTTGCACAGGGCACTCAGTGGATTTTCTTAATGGATGCTCTTGCTGGTTGTGTTGACGGTCCTCCAAGCATCTGCATCACTGGTATTGATGATTCTCAGTCATTTCATGCTCGTGGTGGAGGACTTCATATTGTAGGAGAAAGGTTGGCTAAAGTTGCCGAGTCATATGGAATCCCATTTGAATTCCACTGTGCTTCCATGTCTGGTTGTGAGGTAGATCTCCAAAATCTCCGGATTCAGCCTGTGGAAGCTTTGGCTGTAAATTTTCCATATGTACTGCACCATATGCCTGATGAGAGTGTGACTACGGAGAATCACAGAGATAGGCTATTGAGGCTGGTCAAGAGCTTGTCACCGAAAGTTGTGACCCTTGTTGAGCAAGAGTCGAACACCAACACTTCACCATTCTTTCAAAGGTTTTGTGAGACACTTTATTATTATACAGCCATGTTCGAGTCAATTGATGTAGCGCGTCCTAGGGACGACAAGAATAGGATCAGTGCAGAACAGCAGTGTGTGGCTCGTGATATAGTGAACATGATTGCCTGTGAGGTAGCAGAAAGAGTTGAACGCCATGAACTTTTCGGTAAGTGGAGGTTAAGATTTAGCATGGCTGGTTTTACACCATACCCTTTAAGCTCGTCAGCGACAAATTCAGTCAAAGACATGTTGAGGGGGTACAATGAGAATTACAGAGTTCAGGAGAGGGATGGGGCACTCTATCTAGGCTGGAAAGGTAAAGATATGACTACCTCTTCTGCTTGGAGATGA 1644 0.4337 MRTSQKHQTSASISGLFHHPSQDIDYYQLSQFQILENNVSTDFSNLRTNFALETCKEQYFTLESSSATPGPSGCNSPSGASVSSRRDPFSPQVSQLCLSDPHHSSDNAYGSPMSGSSSADDSNELKHKLKELEISLLGPEMNIVDSCYCCFKSGSCQGTSHWDENNEIKAMIPKLDLKHVLIACAQAVDDADTSTALDLMEMLGQMVSVSGDPMQRLGAYMLEGLRARLESSGSSIYKALKCEEPTSSELMSYMHILFQICPYWKFAYASANAVILQAMANESRIHIIDFQVAQGTQWIFLMDALAGCVDGPPSICITGIDDSQSFHARGGGLHIVGERLAKVAESYGIPFEFHCASMSGCEVDLQNLRIQPVEALAVNFPYVLHHMPDESVTTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFQRFCETLYYYTAMFESIDVARPRDDKNRISAEQQCVARDIVNMIACEVAERVERHELFGKWRLRFSMAGFTPYPLSSSATNSVKDMLRGYNENYRVQERDGALYLGWKGKDMTTSSAWR* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00532 547 ProSiteProfiles GRAS family profile. 168 547 IPR005202 -
Pte19g00532 547 MobiDBLite consensus disorder prediction 63 124 - -
Pte19g00532 547 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 123 540 IPR005202 -
Pte19g00532 547 Pfam GRAS domain family 177 547 IPR005202 -
Pte19g00532 547 MobiDBLite consensus disorder prediction 63 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00532 Pte-Chr19 4241915 4246888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00532 1 547 GRAS Transcription Factor Family AT4G17230 57.482 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte19g00532 GRAS 5.6e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00532 - - qsa:O6P43_012018 764.607