Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00506 ATGAAAATTGATAACTTGAGCGATGAGATGTCTAAGACTGAAGCTGAAGAAGACTCACCGTCATTGAATCGCGGCAATTCATCTCTTCTCATGTCTGTTGTCGCCAATGACAGAGATGGTGACGAGATTTTCGTGCCACCCTTGAACTTCGCGATGGTTGATCATGGCATTTTTCGTTCTGGCTTTCCTGATTCTGCTAATTTGGGCTTCTTGAAATCCCTTGGACTTCGTTCTGTTATATATCTATGTCCTGAACAATACCCGGAACCCATGTCAGCGTTTGTCAAGGCAAATGGAATTAAGCTTTTTCAGTTTGCTATCGATGGCTGCAAGGAGCCTTTTGTGAACATACCAGATGAAACAATTCGTGAAGCATTGAAAGTAGTCCTGGATGCTAGGAACCATCCACTCCTAATTCATTGCAAAAGAGGCAAGCACCGGACTGGTTGTCTTGTAGGATGCTTAAGAAGATTGCAGAGATGGTGTTTGTCCTCTGTTTTCGATGAATACCAAAGGTTTGCTGCATCGAAAGCAAGACTGTCAGACCAGAGATTCATTGAATTATTCGACATCTCAAGCCTGAAGCAAGTGCCCATGTCCTTTTCATGTTTACGAAAGTGA 621 0.43 MKIDNLSDEMSKTEAEEDSPSLNRGNSSLLMSVVANDRDGDEIFVPPLNFAMVDHGIFRSGFPDSANLGFLKSLGLRSVIYLCPEQYPEPMSAFVKANGIKLFQFAIDGCKEPFVNIPDETIREALKVVLDARNHPLLIHCKRGKHRTGCLVGCLRRLQRWCLSSVFDEYQRFAASKARLSDQRFIELFDISSLKQVPMSFSCLRK* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00506 206 ProSiteProfiles Dual specificity protein phosphatase domain profile. 49 203 IPR020422 GO:0006470|GO:0008138
Pte19g00506 206 PANTHER TYROSINE-PROTEIN PHOSPHATASE 38 195 - -
Pte19g00506 206 PRINTS Plant and fungal dual specificity phosphatase signature 100 114 IPR020428 GO:0016791
Pte19g00506 206 PRINTS Plant and fungal dual specificity phosphatase signature 117 131 IPR020428 GO:0016791
Pte19g00506 206 PRINTS Plant and fungal dual specificity phosphatase signature 81 94 IPR020428 GO:0016791
Pte19g00506 206 PRINTS Plant and fungal dual specificity phosphatase signature 44 61 IPR020428 GO:0016791
Pte19g00506 206 ProSitePatterns Tyrosine specific protein phosphatases active site. 139 149 IPR016130 GO:0016311|GO:0016791
Pte19g00506 206 Gene3D Protein tyrosine phosphatase superfamily 43 193 IPR029021 -
Pte19g00506 206 FunFam probable tyrosine-protein phosphatase At1g05000 43 193 - -
Pte19g00506 206 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 44 191 IPR029021 -
Pte19g00506 206 MobiDBLite consensus disorder prediction 1 19 - -
Pte19g00506 206 CDD PFA-DSP_Siw14 44 190 - -
Pte19g00506 206 MobiDBLite consensus disorder prediction 1 24 - -
Pte19g00506 206 Pfam Tyrosine phosphatase family 45 196 IPR004861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00506 Pte-Chr19 4079048 4083152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00506 37 206 Protein tyrosine phosphatase (PTP) family AT4G03960 71.765 6.21e-96 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00506 K18045 - qsa:O6P43_031297 318.546