Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte19g00504 | ATGAGTCAACGCGGTCTGATATTGCAGGAACCAGTACAGAGAGACAGGGAGGCGAGAACCCTTCTTGGTTTCTTGAGAGGGCAAATGGATGGTGTGGATGGAGTTACTGTTCGTCGGCGGAGTCTCAAGGAGCGGCTGGGATTCAAGAGAATGGGTTGCTGTGGGGCTACTTGGGGTTTCAGACCGACCACTTTAAGCGGAAGCCATGACGATGAACCCGCCGAAGAACAAGAACGGGTCGAAGAATTCAACCCGAGTCAACCACTGGTTGTTTCTGGTGCGGGATTGGATGCCCCGTCGGGAATGAATTTAGCAGCTGCTTTGGCAGCCGAGCGTCAGTATCGGGTGTCGGACGGAGGAAATGGTACCGGAGCCGTTACGGGGAGTGACGTGCCAAAAACCCCGTTACGTGTGTCGTTAATGAGGTTGCTGGAGGAAGCGGACGGAGTGGAGAGAGAGCCTGTAACGGTTATGACAGGGACGGAGAAAGAAGGGATGGGTAATGATATGGTGTGCTGCGTGTGCATGGAAAGGATGAAAGGCGCAGCTTTTATCCCATGTGGCCACACGTATTGCAGGGTGTGTTCGCGCGAGCTATGGCTGAATCGAGGTGCCTGTCCCCTTTGCAATCGTATGATAGTTGAGATTCTGGATATCTTCTGA | 663 | 0.5339 | MSQRGLILQEPVQRDREARTLLGFLRGQMDGVDGVTVRRRSLKERLGFKRMGCCGATWGFRPTTLSGSHDDEPAEEQERVEEFNPSQPLVVSGAGLDAPSGMNLAAALAAERQYRVSDGGNGTGAVTGSDVPKTPLRVSLMRLLEEADGVEREPVTVMTGTEKEGMGNDMVCCVCMERMKGAAFIPCGHTYCRVCSRELWLNRGACPLCNRMIVEILDIF* | 221 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte19g00504 | 220 | SUPERFAMILY | RING/U-box | 163 | 217 | - | - | |
Pte19g00504 | 220 | CDD | RING-HC | 172 | 209 | - | - | |
Pte19g00504 | 220 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 165 | 219 | IPR013083 | - | |
Pte19g00504 | 220 | ProSiteProfiles | Zinc finger RING-type profile. | 172 | 210 | IPR001841 | - | |
Pte19g00504 | 220 | PANTHER | OS01G0917900 PROTEIN | 8 | 220 | - | - | |
Pte19g00504 | 220 | Pfam | Zinc finger, C3HC4 type (RING finger) | 169 | 214 | - | - | |
Pte19g00504 | 220 | SMART | ring_2 | 172 | 209 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte19g00504 | Pte-Chr19 | 4069237 | 4070808 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte19g00504 | 21 | 221 | C3H Transcription Factor Family | AT4G22250 | 53.555 | 5.43e-61 | 188 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte19g00504 | - | - | pcin:129286609 | 245.743 |