Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00496 ATGATCAGAAAACCAAACAGAAAATCACCATCTGATTGCTTCGCCACCTTTCTAGCCTTCTTCTTCTTTACTCTACAAGTCCAAGGGAAGTGCAAGTCTGGCTGCAACGTTGCTGTAGCCTCGTACTACATCTGGGAAGGTTCAAACCTCTCTTATATTAGTACCATATTTGGCCGACAAATACCTGAAATTCTCAAATACAATCTCCATATCCCAAACCAAGATTATATCCGCAGTGATACACGGATCAACGTGCCATTCTCGTGTGAATGTTTGAACGGTGACTTCCTAGGCCATACTTTCTCTTACATAAGTCAACCTGGCGATACCTATGGTAAAATTGCTAGGCTTGATTTCTCAAATTTGACCACTGAGAATTGGATGCTAAGAGTGAACACCTACAAACCTACTCAGATACCAAACGGTGTTCCAATCAATGTCACGGTTAATTGCTCATGCGGTGATAAACACGTCTCAGAAGATTATGGGTTGTTTGCGTCGTACCCTCTTCGTCCCGGCGAGAACTTATCCTTTATAGCGGCTGCTGCCGGTGTCCCGGAGGCAGTGCTGAAGAGTTTCAACCCATCGTCCAATTTTGGTGCAGGCACTGGACTTGTTTTTGTGCCGGCCAAAGTGATGCCATTTGAAACAGCACTTTCACATGGAGCCATTGCTGGCATTACTATTGGAGCCGTCACTGCTGGGACTGTCGTTATAGCACTTCTTATATTCTTCACAATCTCTAGAAGAAAGAATGCAGTTCAAACTACATTTTTCCCTGGAGAAACTCAGGACCAATATAACCATCTTGGATCTATCAACTCGGACAAGGCGTCCGAATCAATTAGTGCTGCATCTCAAGGAATGTCAGGTATTACTGTGGATAAGTCGGTGGAGTTTTCTTATGAAGAGCTTGCTAAAGCGACAAGTGACTTCAATGAGTCCAATAAAATTGGACAAGGTGGTTTCGGTGGTGTGTACTATGCTGAGCTTAGAGGCGAGAGAGCTGCCATTAAGAAGATGGATATGCAGGCATCAAAAGAGTTTCTTGCTGAACTCAAAGTTCTTACACATGTCCATCACTTGAATCTTGTACGGTTAATTGGTTACTGTGTTGAGAGCTCCTTGTTTCTGGTTTACGAGTATGTTGAGAATGGCAACTTAAGCCAACATCTGCGCAGCTCAGGGAAGGAACCACCATCTTGGTCCACCAGAGTTCAAATTGCCCTTGATGCAGCTAGGGGACTAGAATATATCCATGAACACACTGTTCCTGTATACATCCATCGTGATATCAAGTCCGCGAACATCTTGATTGACAAAAACTTTCGGGCAAAGGTTGCAGATTTTGGTCTCACAAAACTAACTGAATATGGTAGTTCTTCACTGCACACGCGCCTTGTGGGTACTTTTGGATATATGCCTCCGGAGTATGCACAGTATGGTGATGTTTCTCCCAAGATAGATGTATATGCTTTTGGAGTTGTCCTTTATGAGCTCATATCCGGCAAGGAAGCTATTATAAAGACTAACGAGTTTGTGCCTGAATCAAAAGGACTTGTTGCTCTGTTTGAAGAAGTTTTGTGTAAGCCTGATCCAAGAGAAGATCTACGTAAAATTGTTGATCCTAGGCTTGGTGACAACTACCCTATGGATGCAGTATACAAGATGTCTCAGCTGGCTAAAGCTTGCACTCAAGAAAATCCTCAACTTAGGCCAAGCATGAGGTCCATTGTAGTTGCACTAATGACACTCTCATCCTCAACAGAAGAATGGGATGTTGGTTCCTTTTATGAAAGTCATGCTATTGTCAATCTCATGTCAGGAAGGTAG 1833 0.4326 MIRKPNRKSPSDCFATFLAFFFFTLQVQGKCKSGCNVAVASYYIWEGSNLSYISTIFGRQIPEILKYNLHIPNQDYIRSDTRINVPFSCECLNGDFLGHTFSYISQPGDTYGKIARLDFSNLTTENWMLRVNTYKPTQIPNGVPINVTVNCSCGDKHVSEDYGLFASYPLRPGENLSFIAAAAGVPEAVLKSFNPSSNFGAGTGLVFVPAKVMPFETALSHGAIAGITIGAVTAGTVVIALLIFFTISRRKNAVQTTFFPGETQDQYNHLGSINSDKASESISAASQGMSGITVDKSVEFSYEELAKATSDFNESNKIGQGGFGGVYYAELRGERAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVESSLFLVYEYVENGNLSQHLRSSGKEPPSWSTRVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRAKVADFGLTKLTEYGSSSLHTRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISGKEAIIKTNEFVPESKGLVALFEEVLCKPDPREDLRKIVDPRLGDNYPMDAVYKMSQLAKACTQENPQLRPSMRSIVVALMTLSSSTEEWDVGSFYESHAIVNLMSGR* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00496 610 Pfam LysM domain 46 86 IPR018392 -
Pte19g00496 610 ProSiteProfiles Protein kinase domain profile. 312 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00496 610 CDD STKc_IRAK 318 579 - -
Pte19g00496 610 SMART serkin_6 312 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00496 610 FunFam PTI1-like tyrosine-protein kinase 3 383 596 - -
Pte19g00496 610 Gene3D Transferase(Phosphotransferase) domain 1 383 601 - -
Pte19g00496 610 FunFam LysM receptor kinase 2 291 382 - -
Pte19g00496 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Pte19g00496 610 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 16 596 IPR044812 GO:0019199|GO:0045087
Pte19g00496 610 Pfam Protein tyrosine and serine/threonine kinase 315 581 IPR001245 GO:0004672|GO:0006468
Pte19g00496 610 SUPERFAMILY Protein kinase-like (PK-like) 292 582 IPR011009 -
Pte19g00496 610 Gene3D Phosphorylase Kinase; domain 1 283 382 - -
Pte19g00496 610 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00496 Pte-Chr19 4004984 4009345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00496 15 611 Receptor kinase-like Gene Family AT3G21630 56.515 0.0 667
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pte19g00496 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00496 - K13429 qsa:O6P43_031279 879.782