Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00494 ATGGACAAAGGTGGATGGGGTATCACCCTTGTTGATAGCTCTCTGGAAGCCAAGCAATCTGTCATCCATTCATTTCCAAAGCTCAACCAGCAAAGAATGTTCATGGGTTCGAATGAATTCCCTGTCAATCTTAGACAGCAGGCCGCACCTTCACACCCTGATGACACCAATACGGTTCGTGTAGCTGAGGTCGACTTCTTCTCAGATAGGCAGAAGCTCTCTCTGGCTACTACTACTGATGATCATCATCATCATCGTCATGTGGGTACTACCAGTATCACTGTCAAGAAGGAGAGCAATTACTTTGATCACCAGTCCGATTTAAACGTCAATACGGGGCTGCAGCTTCTTACCGCTAATACTGGAAGTGATCAATCAACGGTTGAAGATGGAGGCTCATCGGATACTGACGATAAGAGAGCCAGAACAGCTGAGCTAGCGAAACTACAACTAGAGCTGCAGCGTATGAATGTGGAAAACGAAAAGCTGAAAGAGATGCTTAGCCAAGTGAGCCATAACTACACTGCGTTACAAATGCAACTCGTGACATTAATGCACCAGCAGCAGCAGCAGCAGAACCATCCACCACATGAGACTGTTGGGCTGATGGAAGCGAAATCTGACGAGAAAAGGCATGGTCAAGGAATAGCGCCAAGGCAGTTTTTACCAGATCATGGTCCAAGCGGTACGGCAGTCGATACCGACGAGGCTTCTAATTCTTCGTCTGAAGAAATAACTCGTTCGGGTACACGTACACCCCGTACTAAACACAGTACTGATGCCGCGAAAGACAGTAGTCCGAGAAATGAGGTAGCAAGGGAAGACAGCCAAGATTCTGGATCACATGGTTGGGTTCCCAATAAGGTTCAGAAATTAAATTTACCCAAGGCTATTGACCAGCCTACAGCTGAAGCTACCATGAGGAAAGCCCGTGTATCTGTCCGTGCTCGATCAGAAGCTCCCATGATTAGTGATGGATGTCAATGGCGGAAATATGGACAAAAAATGGCTAAAGGGAATCCGTGTCCCCGTGCATATTACAGATGCACCATGGCAGTTGGCTGTCCAGTTCGCAAACAAGTTCAACGTTGTGCGGAGGACAAGACAATTCTAATCACTACATATGAAGGCAATCACAATCATCCACTGCCACCTGCTGCGGTGGCCATGGCGTCAACCACGACGGCTGCTGCTAATATGTTACTGTCAGGGTCAATGTCAAGTGCTGATGGATTGATGACGAACCCGAATTTGTTTGCTAGGGCCATACTTCCTTGCTCGTCAAGTATGGCGACAATTTCAGCTTCGGCACCATTTCCTACTGTGACATTGGACCTCACTCACAACTCAAACAACCCATTGCAAATGCAACGTCCTGCAGCCCCATTTGCGGTGCCCTTCATGGCTCAGCCTCAGAATTTCGTATCGGGAGCATCTGCGAGTACATTGCCTCATGCCATTGGACAAGCGCTGTATAACCAATCTAAGTTTTCTGGGCTTCAATTGTCTCAGGAAATGGGATCGTCTCAAGCAGCTCAACAACTCCCACAACCGTTTCTTCAGAACCATCACCCGTCATTGAATGATACATTGAGTGCTGCAACTGCAGCTCTTGCTTCTGATCCAAACTTCACTGCAGCACTAGCAGCTGCCATCTCTACCATCATTGGTGGTCCTCATCCAAATAATGGCGGCAACTCCGGTGACAACAATGGTAACAGCGGTAACTAG 1731 0.4778 MDKGGWGITLVDSSLEAKQSVIHSFPKLNQQRMFMGSNEFPVNLRQQAAPSHPDDTNTVRVAEVDFFSDRQKLSLATTTDDHHHHRHVGTTSITVKKESNYFDHQSDLNVNTGLQLLTANTGSDQSTVEDGGSSDTDDKRARTAELAKLQLELQRMNVENEKLKEMLSQVSHNYTALQMQLVTLMHQQQQQQNHPPHETVGLMEAKSDEKRHGQGIAPRQFLPDHGPSGTAVDTDEASNSSSEEITRSGTRTPRTKHSTDAAKDSSPRNEVAREDSQDSGSHGWVPNKVQKLNLPKAIDQPTAEATMRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAVAMASTTTAAANMLLSGSMSSADGLMTNPNLFARAILPCSSSMATISASAPFPTVTLDLTHNSNNPLQMQRPAAPFAVPFMAQPQNFVSGASASTLPHAIGQALYNQSKFSGLQLSQEMGSSQAAQQLPQPFLQNHHPSLNDTLSAATAALASDPNFTAALAAAISTIIGGPHPNNGGNSGDNNGNSGN* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00494 576 Gene3D WRKY domain 308 385 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g00494 576 Pfam WRKY DNA -binding domain 325 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00494 576 Coils Coil 139 180 - -
Pte19g00494 576 MobiDBLite consensus disorder prediction 249 277 - -
Pte19g00494 576 MobiDBLite consensus disorder prediction 206 294 - -
Pte19g00494 576 ProSiteProfiles WRKY domain profile. 318 384 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00494 576 MobiDBLite consensus disorder prediction 120 139 - -
Pte19g00494 576 MobiDBLite consensus disorder prediction 559 576 - -
Pte19g00494 576 MobiDBLite consensus disorder prediction 232 248 - -
Pte19g00494 576 FunFam probable WRKY transcription factor 31 308 385 - -
Pte19g00494 576 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 110 565 IPR044810 GO:0003700
Pte19g00494 576 SMART WRKY_cls 323 383 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00494 576 MobiDBLite consensus disorder prediction 557 576 - -
Pte19g00494 576 SUPERFAMILY WRKY DNA-binding domain 316 384 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00494 Pte-Chr19 3978332 3980981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00494 1 576 WRKY Transcription Factor Family AT1G62300 49.919 2.06e-153 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte19g00494 WRKY 4.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00494 - - gmx:100802124 577.015