Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00492 ATGTTTATGGAGTACGCAGCAAATGGTACAGTTGTTGATGTCCTTCACAAGCACAATGGTGGACCAGTTGAATCTTTGGTAAGAACAATGACTCGCCAGATATTGCTTGGTCTTCACCATCTCCATTCAAATGGCATAGTGCATTGTGATATCAAGGGCAGAAATGTTTTGGTCAGCGACGAAGGTATCAAGATTGCTGACTTGGGCTGTGCTAGAGTGGTTGATGATGTATCAAGTTCAAAGTGGGTGATCGCTGGTACACCGGCCTTCATGGCGCCAGAGGTGGCGCGTGGAGAGCAACAGGGGCTTCCTGCTGATGTGTGGGCACTGGGTTGCACAGTCATAGAGATGGTAACAGGTCGGGCTCCATGGACCGATATCAATGACCCGATACGTGCACTGTATCGGATTGGATACTCAGGAGATGTACCCGAGATACCGAGTTGTATGTCCAAGCATGGCCGTGATTTCTTGAGTAGGTGCTTGGCTAGTGACCCAAATGATCGGTGGTCAACAAGTGAGCTGCTTAAGCATGAGTTTGTTCAGGAATCCAATTCGGATACTCCAACTGGTGTATTGGACCAAGCAATTTGGGATTCATCGGACGAGTTAGAAACATCATCCGATCCGACCCATTATGTAAATTGGAATTCAACATTGGACAGAATCCAGAGTTTGTGTTTGTCTCAAGAAGCAGCGGCATCATTTTTGAGTGACGACAATTGGGTCACTGTAAGAAGCAACAAGATGAAGAAAGTTCCAGAGTTGCAGGTCAACGAGGATATCAACACAGCTACCGCAGACACTTGCGACAGTGAAAACACCAATTTGGTAAGTGAGGACCATGATGCTATTCTATTCGATGAAGCTCCAAACCCAAATCCAATCACATTCAGCTCTTCAATGGTGTAA 912 0.4627 MFMEYAANGTVVDVLHKHNGGPVESLVRTMTRQILLGLHHLHSNGIVHCDIKGRNVLVSDEGIKIADLGCARVVDDVSSSKWVIAGTPAFMAPEVARGEQQGLPADVWALGCTVIEMVTGRAPWTDINDPIRALYRIGYSGDVPEIPSCMSKHGRDFLSRCLASDPNDRWSTSELLKHEFVQESNSDTPTGVLDQAIWDSSDELETSSDPTHYVNWNSTLDRIQSLCLSQEAAASFLSDDNWVTVRSNKMKKVPELQVNEDINTATADTCDSENTNLVSEDHDAILFDEAPNPNPITFSSSMV* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00492 303 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 261 - -
Pte19g00492 303 SMART serkin_6 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00492 303 SUPERFAMILY Protein kinase-like (PK-like) 1 219 IPR011009 -
Pte19g00492 303 Pfam Protein kinase domain 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00492 303 Gene3D Transferase(Phosphotransferase) domain 1 1 266 - -
Pte19g00492 303 CDD STKc_MAPKKK 1 181 - -
Pte19g00492 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Pte19g00492 303 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00492 Pte-Chr19 3965568 3966600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00492 1 300 MAP Kinase Kinase Kinase AT5G55090 38.298 8.89e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte19g00492 Pkinase 4.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00492 K20716 - qsa:O6P43_031265 339.732