Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00468 ATGATTTGTTCAGTAAAATACTCGTCTATAACATGCTCATCTTTCACAATCAAGAAACTTTCTCTGCCAAGGAATCAACTTTATACACTACCTGCCATTCACAATGTGCAAGCAAGCTTCGATCAGGCACTGTCTTCCCAGAAGCCACTTCACTTTAACTCAGCTGCTGAAAGTTTGACAATTTGGGCAAAACCCAGAAAGAGAATCACAGAATGCAAGGCCTATGAGGCTGAAAGGTCACTGCCATTAGAGATTAACATTGAGCTCCCTGATGAACAAGCTCGGATAGAGGCAGCTCAAAGGCTGAAAATTGGTCTGTATTTCGCGACATGGTGGGCATTGAATGTGGTGTTCAACATTTACAACAAAAAGGTTTTGAATGTTTTTCCTTATCCATGGCTTACCTCTACTCTCTCGCTCGCTGCGGGATCACTTATGATGTTGGTTTCGTGGGCCACCAACATCGCTGAGGCACCGGAAACCGATATGGAGTTCTGGAAGACCCTGTTGCCTGTTGCGGTAGCTCACACTGTTGGGCATGTTGCTGCAACAGTGAGCATGTCAAAAGTTGCAGTTTCTTTCACTCATATCATCAAGAGTGGGGAGCCTGCTTTCAGTGTCCTAGTTTCAAAATTTCTGCTTGGAGAATGTTTCCCCTTGACAGTTTACCTTTCCCTTCTGCCAATTATTGGTGGCTGTGCTCTCTCTGCAGTGACTGAGCTCAATTTCAACATGACAGGGTTTATGGGGGCAATGATATCAAATTTGGCGTTTGTTTTCCGCAATATCTTCTCAAAGAAAGGGATGAAGGGCAACTCTGTCAGTGGAATGAATTACTATGCCTGTCTCTCTATATTGTCACTATTGATTCTCACGCCTCTTGCAATTGCTGTGGAGGGTCCCAGGGTGTGGGCTAGCGGTTGGCAAAAAGCCGTGTCTCAAATTGGTCCCAATTTCGCATGGTGGGTAGCAGCTCAAAGTGTCTTCTACCACATGTACAATCAGGTTTCTTACATGTCACTTGATCAAATATCTCCCTTGACATTTAGCATAGGAAACACAATGAAGAGGATCTCTGTCATAGTTTCTTCCATTATCATCTTTCACACACCTGTCCAGCCCATCAATGCTCTGGGGGCTGCCATTGCCATTCTGGGTACCTTCCTCTATTCACAGGTAAATTTTCGTAATATAAGTCTATCCAAATATTCTTGTCCTGTCTTTCAGGGACATTGTCTACAAAAATGA 1248 0.4391 MICSVKYSSITCSSFTIKKLSLPRNQLYTLPAIHNVQASFDQALSSQKPLHFNSAAESLTIWAKPRKRITECKAYEAERSLPLEINIELPDEQARIEAAQRLKIGLYFATWWALNVVFNIYNKKVLNVFPYPWLTSTLSLAAGSLMMLVSWATNIAEAPETDMEFWKTLLPVAVAHTVGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSKFLLGECFPLTVYLSLLPIIGGCALSAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGNSVSGMNYYACLSILSLLILTPLAIAVEGPRVWASGWQKAVSQIGPNFAWWVAAQSVFYHMYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSIIIFHTPVQPINALGAAIAILGTFLYSQVNFRNISLSKYSCPVFQGHCLQK* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00468 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 294 391 - -
Pte19g00468 415 PANTHER SOLUTE CARRIER FAMILY 35 103 394 - -
Pte19g00468 415 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 237 - -
Pte19g00468 415 Pfam Triose-phosphate Transporter family 102 391 IPR004853 -
Pte19g00468 415 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 102 395 IPR004696 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00468 Pte-Chr19 3819203 3822324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00468 34 405 Antiporters AT1G61800 78.763 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00468 K15283 - qsa:O6P43_031224 593.964