Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00467 ATGAAAAGAAAGCTACAATGTCTTCATATCGTGTTCCTGATGCTTAGTTGTATGATGCAATGTAGTAAAGCCCAACGCAAACACGAACCACGTCCTGCATTACCACCTTCTGCACTAGAAAGCTGCAATGGGATTTTTGTGTCTTATGAATTCAACTCAAGGAGAAAAGAGTTACCGCATCTCAAGAACGCAAGTGCTCAATCTTGGGCCTTCAATGCTACTGCAACTGTTATCAATGCTGGCATAGATGAACTTGATGCATGGAAACTGTTTGTTGGTTTTCAGCATCGAGAGATTCTAGTATCAGCCACAGGAGGAGTTCTGGCTGATGGAGCAGATTTTCCAGCTGATGTTGGAAATGGAGCCCTCTTCTCTGGATCTTCTCCATCTGATTTGGACACCTCCATTGATACTGCTGGAGATCTTAACCAAATCCAAGCAAAAATTGAAATGATAGGAACTCAGTTTGGAGTTAAACCGCCTGAACTCCCTATGCCGAAAACCATTAACTTGGTAAATGATGGATACAAGTGTCCCGCACCAACTCATCGCAAGAGCGTGATGTATGCCTGTTGTCCAAAAGATCCCAAATTCAAAATAAAGAAAACCAAAGAGAAACGCATGCCGCGGAAGCACGGTGACCTTACTATTGCCTATGATGTTCTTCAAGCTTATGAGAACAATTACCTTACACAAGTGACCATAGACAACAATCATCCTTTAGGACGGCTAGACCATTGGAACTTGACCTGGGAATGGATGAGAGGGGAGTTCATATTCTCAATGAAAGGTGCTTACACTCTTGAGTTAGACACTAAAGATTGCATCTTTGGCCCTCCCGGAAAATTCTTCAAAGATATGGATTTTTCCAAGGTCATGAATTGTCAAAAGCAGCCGGTTATAACAGACCTGCCTAAAGAGAAAGCCAATGATACTGATGTCGGGAAAATACCTTACTGCTGTAGAAATGGTAGTCTTTTGTCTGTTGTCATGGATCCAAGCCAATCCAAATCAGTTTTCCAAATGCAGGTCTTCAAAATTCCACCAACAAACCTAACAGCAATTTATCCTCCTGAGAAATGGAAAATCTGGGGAGTTCATAGCCCTACTTATCAATGTGGACCACCAATTAAGGTGGATCCTCAACGGTTCCCTGACCCCGCTGGAACTAGAGCAATCAAACCTGCTATTGGAAGTTGGCAAATAGTTTGCAACATGACAAAGCCTAAGAAAGGAAAGACTAACTGTTGTGTTTCTTTTTCAGCCTATTTCAATGAGTCTGCTGTCCCCTGTAGCACATGTGCCTGTGGTTGTAATGACACAGCCAAGTGTAATCCAAATGCTCCAGCAATGCTCCTTACACCTGAAACTCTTCTCGTGCCATTTGAAAACAGAATCCCGAAGGCGAAAGCATGGGCAGAAATAAAGCATTTTCATATACCAAAACCATTACCTTGTGGTGATAATTGTGGGGTTAGTATAAATTGGCATATTGACTCTGACTTCAATGGTGGGTGGACGGCAAGAGTCACTTTATTCAATTGGGAGCAAATTAATTTTGAGGACTGGTTTATTGCAGTCGAAACAAAAGGTTTCCGTGGTTTTGAAACTGCATACTCTTTCAATGGAACAATACTTAGAGGAATGAATAACACCATCTTACTGCAAGGCTTACCTGGAATGAATTTCTTGGTTGGTGAGAAAAATGGAACAAAAGGACCAAGGACACCAAAAGTTCCTGGAAAGCAACAATCTGTACTTTCATTCTCCAAAGAGAAAACACCAGGAATTAGAATATCAGAAGGAGATGGCTTTCCTACAAAAGTCTTGTTCAATGGAGAAGAGTGTGCCCTTCCAACACGTTTCCCAAGAGGAAATGGACATAGGTCTCATGTAAATTTAGTGCTAGGAGTACTAGTCGTATGCCTGACAGTGATAATGAATCATCTTTGA 1953 0.4168 MKRKLQCLHIVFLMLSCMMQCSKAQRKHEPRPALPPSALESCNGIFVSYEFNSRRKELPHLKNASAQSWAFNATATVINAGIDELDAWKLFVGFQHREILVSATGGVLADGADFPADVGNGALFSGSSPSDLDTSIDTAGDLNQIQAKIEMIGTQFGVKPPELPMPKTINLVNDGYKCPAPTHRKSVMYACCPKDPKFKIKKTKEKRMPRKHGDLTIAYDVLQAYENNYLTQVTIDNNHPLGRLDHWNLTWEWMRGEFIFSMKGAYTLELDTKDCIFGPPGKFFKDMDFSKVMNCQKQPVITDLPKEKANDTDVGKIPYCCRNGSLLSVVMDPSQSKSVFQMQVFKIPPTNLTAIYPPEKWKIWGVHSPTYQCGPPIKVDPQRFPDPAGTRAIKPAIGSWQIVCNMTKPKKGKTNCCVSFSAYFNESAVPCSTCACGCNDTAKCNPNAPAMLLTPETLLVPFENRIPKAKAWAEIKHFHIPKPLPCGDNCGVSINWHIDSDFNGGWTARVTLFNWEQINFEDWFIAVETKGFRGFETAYSFNGTILRGMNNTILLQGLPGMNFLVGEKNGTKGPRTPKVPGKQQSVLSFSKEKTPGIRISEGDGFPTKVLFNGEECALPTRFPRGNGHRSHVNLVLGVLVVCLTVIMNHL* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00467 650 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Pte19g00467 650 PANTHER COBRA-LIKE PROTEIN 7 7 646 - -
Pte19g00467 650 Pfam COBRA-like protein 229 407 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00467 Pte-Chr19 3758887 3761484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00467 11 646 COBRA Gene Family AT3G20580 55.023 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00467 - - qsa:O6P43_031217 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00467 19 3758887 3761484 Pte19g00467 19 3758887 3761484 RCT