Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00465 ATGGCAACTCACACTGAATCTTTGTTGCAAACTCCTAAGAATTCCAATTCTTATGTGAAGACCATCTCTCTAGTTCTCTCTGCTGTAGTTATTGTAGCCTCAACTGCTCTAATTGCCTCTAACCTGACTAAGATTAACCCCACGTCTCCAAATGTATCCCTTCCTCACCAAATATGTCAACGTGCTCAGGAACCAGCAGCATGCATGGCTCTTCTCTCCGAAGTAGTCCAAAACAAAACTCTGCAGACCAAATACCAGACCGATTTACTTCAAGCATTTCTTGAGAGAACCGCAGCTCACATTCAAAAAGTCATACTCGCAACCAATGCTATCAAATATCGGATAAATGATCCTAGACAGCAAATGGCATTGGATGACTGCCAGGAGCTTTTGGATTTATCCATGGGCAGAGTGTTGGAGTCAGTTGTAGCTCTGAGAAATAAGAGCATCGAGTCCTACCAAGACGCACATGCTTGGTTAAGTGCTGTACTCACTAACCACGTCACTTGTTCGGATGGACTTGAAGGGTCAGCACTGTCATGGATGGAGGCTCATCTTAAAGATCTGATATCGAGAGCTAGAACTTCACTAGCCATGTTTGTCTCAATATCACCTCCAAAAGCTGATGAAGGCATAGCACCATTAAATGGCGACGTGCCTTCTTGGCTCCCGAGAGAAGATCGCAAGCTCTTGCAGTTGCGAGCTAAGGATATCAAGGCCAACGTTATTGTGGCTAAGGATGGGAGTGGAAGATTCAAGACTCTCAAAGAGGCAGTGGATTCTGCTCCAAGCAACAGCAACACAAGATTTGTAATCTATGTCAAGAAGGGGATATACAAGGAGAATGTTGAAATTGTCAAAAACAAGAAGAACTTGATGATCGTTGGGGATGGCAAGGACTCAACAGTAATCACCGGCAGCTTGAACGTCGTGGATGGTTCTACAACTTTCAAATCAGCCACCGTTGCTGCTGTAGGAGATGGATTCATAGCTCAAGACATTTGGTTCCAAAACACAGCAGGGCCACAGAAACACCAAGCTGTGGCACTCCGTGTCAGTGCCGATATGTCCGTCATCAACCGCTGCCGGATTGATGCTTTTCAAGACACTCTATACGCTCATTCTCTCCGCCAATTCTACCGCGACTCCTTCATCACCGGTACCATTGACTTCATCTTTGGAAACGCTGCAGTAGTTTTGCAGAACTGCGACCTTGTTGCAAGAAAGCCCATGAGTAATCAGAACAACATGGTGACAGCCCAAGGTCGTGAAGACCCAAACCAAAACACAGGGACCTCCATCCAAAATTGCAATATCAAAGCCAGCTCAGACCTTCAGCCCGTGAAAGGGTCAATCAAAACTTATCTAGGCCGTCCATGGAAACTGTACTCTAGGACAATGGTGATGCAATCGTTCATTGATAACCATGTTGATGCCACTGGATGGTCACCTTGGGATAAGGATTTTGCACTGAACACACTGTACTATGCAGAGTACATGAACCGAGGTCCAGGTGCTGGAACTAGCAAGAGAGTCAAATGGCGAGGTTACCATGTCGTTACCAACCCTGAAGAAGCCAAAAAGTTCACAGTAGCACAGCTCATTCAAGGAGGAGTATGGTTGAAATCAACTGGGGTTGCCTTTACAGAGGGGCTGTAA 1659 0.4581 MATHTESLLQTPKNSNSYVKTISLVLSAVVIVASTALIASNLTKINPTSPNVSLPHQICQRAQEPAACMALLSEVVQNKTLQTKYQTDLLQAFLERTAAHIQKVILATNAIKYRINDPRQQMALDDCQELLDLSMGRVLESVVALRNKSIESYQDAHAWLSAVLTNHVTCSDGLEGSALSWMEAHLKDLISRARTSLAMFVSISPPKADEGIAPLNGDVPSWLPREDRKLLQLRAKDIKANVIVAKDGSGRFKTLKEAVDSAPSNSNTRFVIYVKKGIYKENVEIVKNKKNLMIVGDGKDSTVITGSLNVVDGSTTFKSATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVSADMSVINRCRIDAFQDTLYAHSLRQFYRDSFITGTIDFIFGNAAVVLQNCDLVARKPMSNQNNMVTAQGREDPNQNTGTSIQNCNIKASSDLQPVKGSIKTYLGRPWKLYSRTMVMQSFIDNHVDATGWSPWDKDFALNTLYYAEYMNRGPGAGTSKRVKWRGYHVVTNPEEAKKFTVAQLIQGGVWLKSTGVAFTEGL* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00465 552 NCBIfam pectinesterase inhibitor domain 25 179 IPR006501 GO:0004857
Pte19g00465 552 FunFam Pectinesterase 235 552 - -
Pte19g00465 552 SMART PMEI_2 50 199 IPR006501 GO:0004857
Pte19g00465 552 SUPERFAMILY Pectin lyase-like 239 551 IPR011050 -
Pte19g00465 552 ProSitePatterns Pectinesterase signature 1. 266 285 IPR018040 -
Pte19g00465 552 PANTHER PECTINESTERASE 31 542 - -
Pte19g00465 552 ProSitePatterns Pectinesterase signature 2. 385 394 IPR033131 -
Pte19g00465 552 Pfam Plant invertase/pectin methylesterase inhibitor 54 202 IPR006501 GO:0004857
Pte19g00465 552 Pfam Pectinesterase 241 537 IPR000070 GO:0030599|GO:0042545
Pte19g00465 552 Gene3D - 235 552 IPR012334 -
Pte19g00465 552 CDD PMEI-like_4 88 204 - -
Pte19g00465 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 56 199 IPR035513 -
Pte19g00465 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 204 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00465 Pte-Chr19 3748236 3750598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00465 1 553 Carbohydrate Esterase AT1G11580 57.117 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00465 K01051 - qsa:O6P43_031215 744.962