Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00462 ATGGATCTGCCGGTGGCGTTTCGATGGTGCGCGGCAGTGCCATTGATTATGATTTCTCTTCTGTTGACACCTTCGAGGGCCATCTACTGCGACGAAGACGATTGCTACGATCTTCTAGGGGTTTCTCAGAATGCCAATGCTTCGGAAATTAAAAAGGCTTACTATAAGCTCTCACTGAAATATCACCCTGATAAAAATCCTGATCCAGAATTCCGGAAGCTGTTTGTGAAGATTGCCAATGCTTATGAGGTTTTGAAGGATGAATCCACAAGAGCGCAGTATGATTACGCCATTGCACATCCGGAGGAGGTGTTCTACAATACAGCTCGCTACTACCAGGCATATTATGGTCATAAAACGGATCCTCGTGCTGTCCTCATTGGCCTTCTTCTGATTCTTTCAGCATTTCAATATCTAAACCAATGGACAAGGTATAACCAGGCTATAGACATGGTGAAAAAGACACCAGCGTACAAAAACAAGCTGCGTGCGATGGAGCTAGAACGCAGTGGCGGAACTGCAAGCAAGAAGAAGGGTCAGAAGCAGACAGACAAGAAAATAGAGGAAGATCTTTGTAAAGAACTTGACCTGCAGATAAGGGGAGCTGAAAAGCCATCGATCTGGCAACTGATTGGTGTCCGTTTTGTACTCCTTCCTTATACTATTGGCAAGCTGTTGCTGTGGTCTGCCTCTTGGCTTTGGAGATACAAAGTGAAGAGAGCTCCTTATTCATGGGAAGATGCCTCATATTTGACAAATCGATCCCTTGGAGTGCCTCAGGATGTTTGGAATACTTTAGATGAAGCAAAAAAGGATGATCTTGTGCGTAGACGCCTTTGGGTAAAAGCAAACTTGGAGAGCTACTGGACTGAGATGCGGAAGGAATCAAAACGCAGAAGATAA 903 0.4485 MDLPVAFRWCAAVPLIMISLLLTPSRAIYCDEDDCYDLLGVSQNANASEIKKAYYKLSLKYHPDKNPDPEFRKLFVKIANAYEVLKDESTRAQYDYAIAHPEEVFYNTARYYQAYYGHKTDPRAVLIGLLLILSAFQYLNQWTRYNQAIDMVKKTPAYKNKLRAMELERSGGTASKKKGQKQTDKKIEEDLCKELDLQIRGAEKPSIWQLIGVRFVLLPYTIGKLLLWSASWLWRYKVKRAPYSWEDASYLTNRSLGVPQDVWNTLDEAKKDDLVRRRLWVKANLESYWTEMRKESKRRR* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00462 300 SUPERFAMILY Chaperone J-domain 29 106 IPR036869 -
Pte19g00462 300 SMART dnaj_3 33 90 IPR001623 -
Pte19g00462 300 Gene3D DnaJ domain 22 121 IPR036869 -
Pte19g00462 300 FunFam Chaperone protein dnaJ 50 21 121 - -
Pte19g00462 300 PRINTS DnaJ domain signature 36 54 IPR001623 -
Pte19g00462 300 PRINTS DnaJ domain signature 70 90 IPR001623 -
Pte19g00462 300 PRINTS DnaJ domain signature 54 69 IPR001623 -
Pte19g00462 300 ProSiteProfiles dnaJ domain profile. 34 98 IPR001623 -
Pte19g00462 300 CDD DnaJ 34 87 IPR001623 -
Pte19g00462 300 ProSitePatterns Nt-dnaJ domain signature. 75 94 IPR018253 -
Pte19g00462 300 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 25 13 299 IPR044632 GO:0006457
Pte19g00462 300 Pfam DnaJ domain 34 95 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00462 Pte-Chr19 3729909 3733389 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00462 36 106 C2H2 Transcription Factor Family AT1G74250 33.766 6.76e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00462 K19371 - tcc:18597090 504.212