Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00382 ATGAGTTTTGGGGTTTTTGCAAACAACAACTCTGGTGGTGGCGGTGCTAGAATAGTGGCTGATATATCTTACGGGGACAGTGACAACAGCTACGATATGCCCTCTGGTGCAATCTCACAGCCACGGCTTGTTACTCCCACAGTGGCCAAATCTATGTTCCACTCCCCTGGACTCTCACTTGGACTTCAAACGAATATTGATGAACAAAGGGAAATGGCTAGAATACCTGAGAACTTTGAACCAATTATTGGGAGAAGGAGTAGAGAGGAAGAACATGAGAGCAGATCCGGGAGTGATAACGTTGATGGTGTTTCAGGTGATGATCAAGATGCTGCCGACCAGCCCCCCAGAAAGAAACGTTATCACCGACACACTCCTCAACAAATCCAAGAGCTTGAAGCTCTTTTCAAGGAGTGCCCTCATCCTGACGAGAAGCAAAGGTTGGAACTTAGCAGACGGCTTTGCTTGGAAACGAGGCAGGTGAAGTTTTGGTTCCAAAATCGAAGAACTCAGATGAAGACTCAACTGGAACGCCATGAGAACTCTTTGCTTAGAGCTGAGAATGATAAACTTAGATCTGAAAACATGTCAATCAGAGAAGCAATGAGGAATACAATTTGCTCTAACTGTGGAGGTCCAGCTATTATTGGAGAGATTTCACTAGAAGAGCAGCATCTGAGAATTGAGAATGCAAGGTTGAAGGAAGAGTTAGACAGGGTTTGTGGACTAGCAGGGAAGTTCTTAGGCCGGCCTATTTCTTCATTATCTAACCCAATCGGTCATTCATTACCAAACTCAAGCTTGGAGCTTGGAGTCGGTAGTAATGGTTTTGGTGGAATGAGTACTGTAGCTACAACATTGCCTTTAGGGCCTGATTTTGATGTTGGAATATCGAGTGCTTTACCTGTAGTATCACCCACTAGACCATCAGCTGCTGTAACAAGCTTTGACAGATCAATTGAGAGGTCTATGTTTTTGGAGATTGCGTTAACTGCAATGGACGAATTGTTCAAAATGGCACAGACCGATGAACCCCTTTGGGTTAGAAGTTTGGATGGAAGGTGCATTTTGAACCATGAAGAGTACATGAGAACGTTCACCTCTTGTAGTGATTTGAAACCCAATGGCTTTGTCACTGAGGCTTCTAGAGAGACGGGCACGGTGATCATAAACAGCTTGGCTCTAGTTGAAACCTTGATGGACTCGAATCGATGGGCAGAGGTGTTTCATTCTATTGTTGCCAGAACCTCTACTACGGATGTGATATCTAGTGGAATGGGTGGAACAAGAAATGGTGCACTTCAGCTGATGCATGCGGAACTGCAAGTTCTTTCTCCTTTGGTTCCTGTTCGCGAAGTCAATTTCCTAAGGTTTTGCAAGCAGCACGCAGAGGGTTTGTGGGCTGTGGTAGATGTGCCCATTGAAACCCTTCGGGAAATTTTAGGTGCACCGACATCTATGAACTGTAGGAGGCTTCCTTCTGGTTGCGTGGTGCAAGATATGCCCAACGGCTACTCTAAAGTGACATGGGTTGAGCATGCTGAATATGATGAAAGCCAAATCCACCAACTCTACCGGCCATTGTTAAGATCAGGCATGGGTTTTGGTGCTCAGCGTTGGGTGGCTACCCTGCAACGTCAATGTGAATGCCTAGCTATCTTAATGTCCTCTACCATCCCCACCCGTGACCACACAGGTAGTACACTCATTACAGCAAGTGGGAGACGCAGCATGCTGAAGCTTGCGCAACGAATGACAGACAACTTCTGTGCAGGAGTCTCTGCATCAACAGTTCACAAATGGAACAAGCTCAATGCCAGCAATGTCGGAGAGAATGTTCGCGTCATGACAAGGAAGAGTGTAGATGACCCCGGCGAGCCACCAGGTATTGTGTTGAGCGCAGCCACCTCTGTATGGCTTCCAGTCTCTCCTCAAAAACTTTTTGATTTCTTGCGTGATGAGCGGCTCAGAAGTGAGTGGGATATCCTCTCCAATGGTGGCCCTATGCAGGAAATGGCTCATATTGCTAAAGGTCACGACCATGGCAACTGTGTTTCTCTACTGCGTGCCAGTGCTATGAATGCAAACCAAAGCAGTATGCTGATACTACAAGAGACATGCATAGACTCAGCTGGTTCTCTTGTGGTGTACGCTCCGGTTGACATACCAGCCATGCATGTGGTGATGAACGGTGGTGATTCTGCATATGTGGCCCTACTACCATCTGGCTTTGCCATTGTCCCAGATGGACCTAGTTCAGATGTGGCTTCCACAGGCAACAATGGAGGGAGCCATTCTAATGGGGGTTCACTCCTTACAGTGGCCTTTCAGATACTCGTGAATAACCTTCCTACTGCTAAGCTCACGGTAGAGTCAGTGGAGACAGTGAACAATCTGATCTCATGCACTGTCCAGAAGATCAAGGCTGCGCTTCATTGTGAAAGCTGA 2448 0.4685 MSFGVFANNNSGGGGARIVADISYGDSDNSYDMPSGAISQPRLVTPTVAKSMFHSPGLSLGLQTNIDEQREMARIPENFEPIIGRRSREEEHESRSGSDNVDGVSGDDQDAADQPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSRRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRAENDKLRSENMSIREAMRNTICSNCGGPAIIGEISLEEQHLRIENARLKEELDRVCGLAGKFLGRPISSLSNPIGHSLPNSSLELGVGSNGFGGMSTVATTLPLGPDFDVGISSALPVVSPTRPSAAVTSFDRSIERSMFLEIALTAMDELFKMAQTDEPLWVRSLDGRCILNHEEYMRTFTSCSDLKPNGFVTEASRETGTVIINSLALVETLMDSNRWAEVFHSIVARTSTTDVISSGMGGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGLWAVVDVPIETLREILGAPTSMNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQIHQLYRPLLRSGMGFGAQRWVATLQRQCECLAILMSSTIPTRDHTGSTLITASGRRSMLKLAQRMTDNFCAGVSASTVHKWNKLNASNVGENVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPQKLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGHDHGNCVSLLRASAMNANQSSMLILQETCIDSAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPSSDVASTGNNGGSHSNGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIKAALHCES* 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00382 815 SUPERFAMILY Bet v1-like 580 808 - -
Pte19g00382 815 Coils Coil 169 196 - -
Pte19g00382 815 ProSitePatterns 'Homeobox' domain signature. 150 173 IPR017970 GO:0000981|GO:0006355
Pte19g00382 815 ProSiteProfiles START domain profile. 318 553 IPR002913 GO:0008289
Pte19g00382 815 SUPERFAMILY Bet v1-like 320 550 - -
Pte19g00382 815 Gene3D - 104 190 - -
Pte19g00382 815 FunFam Homeobox-leucine zipper protein HDG1 105 191 - -
Pte19g00382 815 FunFam Homeobox-leucine zipper protein GLABRA 2 327 549 - -
Pte19g00382 815 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 114 812 IPR042160 -
Pte19g00382 815 MobiDBLite consensus disorder prediction 73 98 - -
Pte19g00382 815 MobiDBLite consensus disorder prediction 73 125 - -
Pte19g00382 815 Pfam START domain 327 550 IPR002913 GO:0008289
Pte19g00382 815 Pfam Homeodomain 118 173 IPR001356 GO:0003677
Pte19g00382 815 ProSiteProfiles 'Homeobox' domain profile. 115 175 IPR001356 GO:0003677
Pte19g00382 815 SMART START_1 327 550 IPR002913 GO:0008289
Pte19g00382 815 CDD homeodomain 117 175 IPR001356 GO:0003677
Pte19g00382 815 SUPERFAMILY Homeodomain-like 102 175 IPR009057 -
Pte19g00382 815 SMART HOX_1 116 179 IPR001356 GO:0003677
Pte19g00382 815 CDD START_ArGLABRA2_like 322 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00382 Pte-Chr19 2953424 2959711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00382 1 815 Homeobox Transcription Factor Family AT3G61150 65.509 0.0 1045
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte19g00382 START 1.5e-52 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00382 K09338 - qsu:111991611 1352.04