Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00381 ATGCATAATTTTGTTCCATCATCAACTTCTGTTCCAGCTGATGCTGGCGTTGACCGAGTGCCTCTTCTAAGCAACTACGTCGCAGACAACCTTATAAGAAGCCAGCGGCATATTCGCCGTCCACCCCCGCGTTTAGGTACTGCTGCCAGGTTCCTCCGGAGAGCTAGTGCCCGGCGTATGATGCTCAGGGAGCAATCTATGCGGGTACGCGAGAACGCTGCCGAGCAGCTGGAGGAGAGGCACAGTGACTGGGCATATTCTAAGCCTGTTACTGTATTGGATATCTTGTGGAATTTGACCTTTTGTGGAATTGGGTGTGCTGTGTTGTGGTTGAGTTCGAAGGAAAAGCCTTTTGTTCCTTTGAGGTTGTGGATTTTTGGATATATCCTTCAGTGCATGTTTCACGTTGTGTGTGTTGTAGTGTACTATAGGCAGAGGCGTCAGACAAGTTTAATAGGGACGGAGCAGAATGCGGGGTGGGACAGTGGCGAGAGCTCAAGTTCTGAGTCTGGGAGTGATGGGGATGATTATGATATGCAACAGATTCAGGATGATGAAACAACCAGTGTTACCAAACATTTAGAATCTGCAAACGCCATGTTCTCGTTTATGTGGTGGATTCTTGGATTCTACTGGGTGACTTCTGATAGCCAAGACTTAACACAGGACGCACCTCAACTTTACTGGCTTTGTATTGCATTTCTAGCTTGTGATGTTGTGATTGTATTGATCTGTGTTGCTGTGGCATGTCTTATTGGTATTGCCGTTTGCTGCTGCTTGCCTTGTATAATTGCTATATTGTACCTTGTGACAGACCAGCAAGGAGCAACAAAAGAAGAGATAGAGAAACTACCAAAGTTCAAGTTTTGCAGGCTCAATGAATATGAGAAAGTGAATGGTGAGATCCAAGGACAATCAAGAGGACTAATGACAGAATGCAGTACTGATGAGCCAACTGAGCGACTTCTTTTGCTGGAAGACGCTGAATGTAGCATCTGCCTCTGTGTATATGACAATGGAAGTGAACTGAGAGAACTTCCTTGTCATCACCACTTCCATTGTGCCTGCATAGACAAGTGGTTACAGATCAATGCAATCTGCCCTCTCTGCAAATATAACATTTTAAAGTCTGGCTACCAACGGGGACAAGTATGA 1155 0.4554 MHNFVPSSTSVPADAGVDRVPLLSNYVADNLIRSQRHIRRPPPRLGTAARFLRRASARRMMLREQSMRVRENAAEQLEERHSDWAYSKPVTVLDILWNLTFCGIGCAVLWLSSKEKPFVPLRLWIFGYILQCMFHVVCVVVYYRQRRQTSLIGTEQNAGWDSGESSSSESGSDGDDYDMQQIQDDETTSVTKHLESANAMFSFMWWILGFYWVTSDSQDLTQDAPQLYWLCIAFLACDVVIVLICVAVACLIGIAVCCCLPCIIAILYLVTDQQGATKEEIEKLPKFKFCRLNEYEKVNGEIQGQSRGLMTECSTDEPTERLLLLEDAECSICLCVYDNGSELRELPCHHHFHCACIDKWLQINAICPLCKYNILKSGYQRGQV* 385
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00381 384 SUPERFAMILY RING/U-box 319 376 - -
Pte19g00381 384 MobiDBLite consensus disorder prediction 156 178 - -
Pte19g00381 384 Pfam Ring finger domain 329 371 IPR001841 -
Pte19g00381 384 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 306 378 IPR013083 -
Pte19g00381 384 SMART ring_2 330 370 IPR001841 -
Pte19g00381 384 PANTHER TARGET OF ERK KINASE MPK-1 56 375 - -
Pte19g00381 384 ProSiteProfiles Zinc finger RING-type profile. 330 371 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pte19g00381 Pte-Chr19 2944263 2950985 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00381 31 380 C3H Transcription Factor Family AT1G68070 46.459 6.68e-103 306
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00381 - - qsa:O6P43_027190 531.946