Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00379 ATGCCTCGTGGTACGCTTGAAGTTCTTCTTGTCAGTGCCAAGGGCCTTGACGACGCTGACTTTCTCTCCAACATAGATCCCTATGTGATTCTGACATACCGGACTCAGGAGCACAAGAGCAATATGGTCTCAGGTGGAGGATCTAATCCAGAATGGAATGAGAGTTTTCTGTTTACCATCCAAGATGATGTTTCAGAACTCAGATTGAAGATTATGGATAAGGATAACTTCAACAGTGATGATTTCCTTGGGGAGGCCATCGTTCCATTGGAGCCAGTTTTCATTGAGGGAACTGTTCCGAATACTGCATATAATGTTGTGAAGGATGAAGAATATCGTGGGGAAATCAGGGTATCCCTTACTTTCACTCCCGAGTTGGCAGCAGGAGGCTGTGTGGCAGAGGAGGAAAGCTATGGCGGATGGAAGGAGTCATCAGCTTACTAA 444 0.4595 MPRGTLEVLLVSAKGLDDADFLSNIDPYVILTYRTQEHKSNMVSGGGSNPEWNESFLFTIQDDVSELRLKIMDKDNFNSDDFLGEAIVPLEPVFIEGTVPNTAYNVVKDEEYRGEIRVSLTFTPELAAGGCVAEEESYGGWKESSAY* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00379 147 Gene3D C2 domain 2 125 IPR035892 -
Pte19g00379 147 PANTHER C2 DOMAIN-CONTAINING 1 124 - -
Pte19g00379 147 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pte19g00379 147 SMART C2_3c 5 102 IPR000008 -
Pte19g00379 147 Pfam C2 domain 4 100 IPR000008 -
Pte19g00379 147 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00379 Pte-Chr19 2940953 2941949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00379 4 94 C2H2 Transcription Factor Family AT4G21160 31.868 4.21e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00379 - - egr:104443785 213.386