Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00355 ATGGGCATTAATTGTTCCAAACTCTTGCCATGTTGCTGGAGCTCACAAGTCAAAGCATCAGTTCTTGAAACTCCTAATGCTGAGAAAGAGGAAAGCGGTGAGAGTAGCTTCTTGCCTGCGTTTCGTGAATTCACATTGGAGCAGCTGAAAAATGCTACATCTGGTTTTGCAACGGACAACATTGTATCAGAGCATGGAGAAAAGGCTCCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAGACGAAGATCGCTGTCAAGCGCTTTAACAGAAATGCCTGGCCAGACAATCGACAGTTTTTGGAGGAAGCAAGATCAGTTGGCCAGCTCCGTAACTATAGATTGGCAAATTTGCTTGGTTGTTGTTGTGAAGGAGATGAAAGGTTGCTTGTCGCAGAATTTATGCCCAATGAAACACTTGCAAAGCATCTCTTCCATTGGGAGGCACAACCCATGCAATGGGCAATGCGACTGAGAGTTGTTCTACATCTTGCACAAGCTTTAGAGTACTGCTCAAGTAAAGGCCGTGCCCTTTATCATGATCTCAATGCCTACAGAGTTTTATTTGATGAGGATGGAAATCCTAGACTTTCAAGCTTTGGGCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACCAATCTGGCATTTACTCCTCCAGAGTATCTTAGAACAGGTAGAGTGACACCTGAAAGTGTGATATATAGCTTTGGTACTCTTTTACTTGATCTTCTCAGTGGGAAGCATATTCCCCCAAGCCATGCCCTTGACTTGATTCGGGACAGAAATCTGCACATGCTGACAGATTCTTGCTTGGAAGGACAGTTTTCTGACAATGATGGAACTGAGTTAGTACGTTTGGCCTCTAGATGTTTACAATACGAACCTAGAGAAAGGCCAAATCCAAAGTCCTTGGTATCTGCTTTGACTCCTCTTCAGAAGGAAACTGAGGTTCCTTCACATGTTTTGATGGGTATTCCACACAGTGCTACTTTTTCCTCTCTTTCTCCCCTTGGCGAAGCATGCTCAAGAAGGGACTTGACTGCCATACACGAATTTCTAGAAAGTATTGGCTATAAAGATGACGAAGGGGTAACCAATGAGCTATCTTTTCATATGTGGACTGACCAAATGCAGGAAACTTTAAATACCAAAAAGAAGGGCGATGTCGCATTTCGCCAGAAAGATTTTGCACTTGCAATTGACCTCTACACACAGTTCATTGAAGCTGGCACAATGGTATCACCCACAGTACATGCAAGGCGCAGTCTATCTTATCTGATGAGCAGCATGGCTCAAGAAGCACTGCATGATGCAATGCAAGCACAAGTCATTTCCCCTGTATGGTACATTGCATCATATCTTCAGGCTGCCGCACTCTCTGCACTTGGAATGGAGAATGAGGCAAAAGTGGCATTGGACGAGGGCACTACTCTAGAAGCCAAGCGGATTGTAGGTGCTGGACAGAAGTGA 1476 0.4411 MGINCSKLLPCCWSSQVKASVLETPNAEKEESGESSFLPAFREFTLEQLKNATSGFATDNIVSEHGEKAPNVVYKGKLENQTKIAVKRFNRNAWPDNRQFLEEARSVGQLRNYRLANLLGCCCEGDERLLVAEFMPNETLAKHLFHWEAQPMQWAMRLRVVLHLAQALEYCSSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLHMLTDSCLEGQFSDNDGTELVRLASRCLQYEPRERPNPKSLVSALTPLQKETEVPSHVLMGIPHSATFSSLSPLGEACSRRDLTAIHEFLESIGYKDDEGVTNELSFHMWTDQMQETLNTKKKGDVAFRQKDFALAIDLYTQFIEAGTMVSPTVHARRSLSYLMSSMAQEALHDAMQAQVISPVWYIASYLQAAALSALGMENEAKVALDEGTTLEAKRIVGAGQK* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00355 491 SUPERFAMILY Protein kinase-like (PK-like) 32 320 IPR011009 -
Pte19g00355 491 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Pte19g00355 491 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Pte19g00355 491 SUPERFAMILY TPR-like 385 480 IPR011990 GO:0005515
Pte19g00355 491 ProSiteProfiles Protein kinase domain profile. 59 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00355 491 FunFam probable serine/threonine-protein kinase At4g35230 380 488 - -
Pte19g00355 491 Gene3D Tetratricopeptide repeat domain 380 486 IPR011990 GO:0005515
Pte19g00355 491 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Pte19g00355 491 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 19 484 IPR045845 GO:0004672|GO:0009742
Pte19g00355 491 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Pte19g00355 491 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00355 Pte-Chr19 2728181 2731991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00355 26 310 Glycoside Hydrolase AT3G07070 33.442 3.18e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pte19g00355 PK_Tyr_Ser-Thr 5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00355 K14500 - qsa:O6P43_017614 870.537