Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00342 ATGGCAAATAGGACAGAAATTCTTCGGGGGCCTGCTTCGGACTTGAACAGGGATACCATCTATGTTGCTGTATCATCAGAAGTTAAGGAAAGCAAATCAATTTTGATATGGGCAATCCAGACTTCTGGAGGGAAGAGAATTTGCATTCTTCATGTTCATGTGCCTGCACAAATGATCCCCTTAATGGGAACAAAATTTTTGGCAAGTGCTCTGAAAGAACAGGAAATTATAGCTTACAGGGAAATTGAAAGGCAAAAGATGCATAAACGTCATGATGAACATCTTCTCCTATGTCAAAGGATGGGGGTGCAGGCAGAGAAACTGTACCTTGAAATGGATTGTATTGAAAAAGGTATTGTTGAACTCATTTCACGATATGGTATTCGAGATCTGGTCATGGGAGCAGCATCAGATAGACACTATTTCAGAAAAATGATAGACCTCAGATCAAAGAAAGCCATCTATGTACATGAACAAGCTCCTTCTTCCTGTTGCATATACTTTGTCTACAGAGGGCACCTTATTCACACCAGATATGCAGGAGAAAGCATGCTATTTCCTGTTTCTTCTAGAGATGATACTCAAGTGCTCTCAACTCGGGATAGCAGACAGTATGCAGAACCAAAGTCTGAGGAATCTTATGGACCATCAAGAGTCAGTCCTTCAGCTTTCTCTACGTGCTCCTCTAGTAGTGTTAATGAAGCAAGACATGACACAAATGCAATTACTGATGGTAGTGATTTGTTAGGGTTAAGTGCAGATCCTCAGAGAAAAGTAGATCTTATATCATCTCCTCCCAGTGTACTGGGTGGCACTATGGATGATATTCTGTTAGATCAGCTTGAGCAAGCCCAGATTGAAGCAGAAAATGCAAGGATGGAAGCATTTCAACAGTCTATCAAGCGTGGAAGAGCAGAAAAAGATGCAGTTGAGGCAATGCACAGGCTTAAAGTTTCTGAAACCTTGTATAATGAGGAATTGCAACTAAGAAAAGGAGTTGAACATGCACTGAAGAAGGAGAAGGAAGAACTTGAAAAGACAAAGCGACAGCATGATGGAATCAAGGAACCACTCGAGTTTGCCTTAGAACAGAAATCCTCTCTGGAGAGCCAAATAGCTGCATCTGAACAAATGGTAGAAGAGTTGGAGCAGAAGATTATATCTGCTGTGGATCTTTTACAGAATTATAGGAAGGAACGAGATGAGTTGCAGGTACAGCGTGATAATGCATTAAGAGAAGCTGCAGAGTTGAGGAAACAAGGAGAGACTTCGTCTACACGTGTACTACAATTCTTTTTGGAGTTCTCCCTCCCAGAGATTGTAGAAGCAACAAGAAACTTTGATTCGTCCCTTAGGATTGGAGAAGGTGGACACGGAAGCATTTATAGAGGTAGATTGCGTCATACTGAGGTTGCTATGAAAATGCTCCACTCTAATAGCATGCAAGGTCCATTAGAATTTAGACAAGAGGTTGATGCATTGAGCAAATTGAGGCACCCCAACATTATCACTCTAATTGGAGCTTGCCCCGAGTCTTGGATTCTCGTGTATGAGTACCTACCAAATGGAAGCCTTGAAGATCGTCTTCGTTGTAAAGATAATACTCCTCCTTTATCATGGCAAACTCGAATACGCATTGCCAATGAACTTTGTTCTGCTCTTATTTTTCTTCATTCAAGCAAGTCTCACTGTATTGTGCATGGTGATTTAAAGCCATCCAATATTCTTCTTGATGCTAACTTGGTTAGCAAGCTTAGTGATTTTGGAATATGCAGTGTGCTATCCGACCATGATGATTCAAGTACTAATGAAACCACATTTTGGAGAACTGACCCAAAGGAGACCTTTGTGTATATCGACCCTGAGTTCATTGCCTCAGGGGAACTTACTCCAAAGTCAGATGTTTATTCATTTGGAATCATAATGCTTTGGTTGCTGACAGGGCGACCTGCCTTAGGAATAACGAAGGAAGTGCAGTATGCATTGGATTCAGGTAAGTTGAAGAACCTATTGGATCCTGTTGCTGGGGATTGGCCTTTTGTGCAGGCTGAACAGTTGACTCGCTTAGCATTGAGATGTTGTGAGAGAAATAGGAAAAACCGGCCCGATCTTGCATCAGAAGTATGGAGGATTTTAGAACCAATGAGAGCTTCTTGTGGGGGTGCATCCTCTTTCCAGTCACCTTCTGAAGAGCTTTACCAACCTCCATATTTCATTTGTCCAATATTCCAAGTGCGTGCTTTTGTTTTAAACTTGCCTTTTTCTGAAGTTAAGACTTGA 2280 0.4154 MANRTEILRGPASDLNRDTIYVAVSSEVKESKSILIWAIQTSGGKRICILHVHVPAQMIPLMGTKFLASALKEQEIIAYREIERQKMHKRHDEHLLLCQRMGVQAEKLYLEMDCIEKGIVELISRYGIRDLVMGAASDRHYFRKMIDLRSKKAIYVHEQAPSSCCIYFVYRGHLIHTRYAGESMLFPVSSRDDTQVLSTRDSRQYAEPKSEESYGPSRVSPSAFSTCSSSSVNEARHDTNAITDGSDLLGLSADPQRKVDLISSPPSVLGGTMDDILLDQLEQAQIEAENARMEAFQQSIKRGRAEKDAVEAMHRLKVSETLYNEELQLRKGVEHALKKEKEELEKTKRQHDGIKEPLEFALEQKSSLESQIAASEQMVEELEQKIISAVDLLQNYRKERDELQVQRDNALREAAELRKQGETSSTRVLQFFLEFSLPEIVEATRNFDSSLRIGEGGHGSIYRGRLRHTEVAMKMLHSNSMQGPLEFRQEVDALSKLRHPNIITLIGACPESWILVYEYLPNGSLEDRLRCKDNTPPLSWQTRIRIANELCSALIFLHSSKSHCIVHGDLKPSNILLDANLVSKLSDFGICSVLSDHDDSSTNETTFWRTDPKETFVYIDPEFIASGELTPKSDVYSFGIIMLWLLTGRPALGITKEVQYALDSGKLKNLLDPVAGDWPFVQAEQLTRLALRCCERNRKNRPDLASEVWRILEPMRASCGGASSFQSPSEELYQPPYFICPIFQVRAFVLNLPFSEVKT* 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00342 759 Coils Coil 330 350 - -
Pte19g00342 759 ProSitePatterns Protein kinases ATP-binding region signature. 453 474 IPR017441 GO:0005524
Pte19g00342 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 565 577 IPR008271 GO:0004672|GO:0006468
Pte19g00342 759 ProSiteProfiles Protein kinase domain profile. 447 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00342 759 MobiDBLite consensus disorder prediction 195 231 - -
Pte19g00342 759 Coils Coil 358 420 - -
Pte19g00342 759 Pfam Protein kinase domain 452 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00342 759 SMART serkin_6 447 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00342 759 MobiDBLite consensus disorder prediction 215 231 - -
Pte19g00342 759 PANTHER OS02G0152300 PROTEIN 20 718 - -
Pte19g00342 759 Gene3D Transferase(Phosphotransferase) domain 1 520 725 - -
Pte19g00342 759 SUPERFAMILY Protein kinase-like (PK-like) 424 710 IPR011009 -
Pte19g00342 759 Coils Coil 274 306 - -
Pte19g00342 759 Gene3D Phosphorylase Kinase; domain 1 432 519 - -
Pte19g00342 759 CDD STK_N 19 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00342 Pte-Chr19 2655823 2662154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00342 7 744 U-box Gene Family AT2G45910 54.800 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pte19g00342 Pkinase 7.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00342 - - lja:Lj1g3v2661410.1 939.488