Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00334 ATGTACGATCCCCGTAAAGCAAACTCCGGTAATCGGAAAACGCCTGAAAGGGTCCGTTACTCCCCAGCTTACTCCGACGCTTCTTTCGACCCGAAGTCAACTCCTAGTCGGAAGAGTGCAGTTTCTGCCGCCGCTCGATCAGTTGCCGGAGTTTTAATAGCCTGCTTTACGCCACCTGATACCAGCAGCTCCAAAAGTGTTTCTGTTTTTGAAGAGTCCAAAGCTCCTTCTGTTGTATCGGATGCTTATTCAAGAGATGGCAGTGACAGAAGACGTGCCTCAAACCGAGGCAACGATGTGAACTCGTATAATTCAGTTCAGGGGAAAGATCCAGGGAATAGAAATTTTACAATCAACGATATATGTCTGGCAACTAGGAATTTTTCTCCCTCTTTCAAAATTGGTCAAGGTGGTTTTGGAACAGTCTACAAGGGGAGACTCCCTGATGGATCTGTCGTTGCAATCAAACGTGCAAAGAAGAGTGTATATGATAAGCATTTAGGTGTGGAGTTCCAAAGCGAGGTCCGTACATTATCACAGGTAGAGCATTTGAACTTGGTTAAGTACTATGGCTATCTGGAGCATGAAGATGAAAGAATACTCATCGTAGAGTATGTGCCAAATGGAACATTGAGAGAGCACTTAGATTGCATACATGGTGAGGTTCTTGATCTTGCTGCAAGACTAGATATTGCGATTGATGTGGCCCATGCCATCACCTATCTTCATATGTATGCAGATCATCCTATAATTCATAGAGATATAAAATCTTCCAACATTCTCCTCACGGAGAACTTCAGAGCCAAAGTGGCTGATTTTGGCTTTGCTAAACTTGTATCCGACAGTGATTTAGGTGCAACTCATGTCTCTACTCAAGTTAAAGGAACTGCAGGCTATTTGGATCCTGAGTACCTCAAAACCTACCAGCTTACTGAGAAGAGTGATGTTTATTCTTTTGGTGTTTTACTCGTTGAACTAGTCACAGGCAGACGCCCCATTGAACCAAAACTTGAATGCAAGGAGCGAATAACTCCAAAATGGGTGTGA 1047 0.4365 MYDPRKANSGNRKTPERVRYSPAYSDASFDPKSTPSRKSAVSAAARSVAGVLIACFTPPDTSSSKSVSVFEESKAPSVVSDAYSRDGSDRRRASNRGNDVNSYNSVQGKDPGNRNFTINDICLATRNFSPSFKIGQGGFGTVYKGRLPDGSVVAIKRAKKSVYDKHLGVEFQSEVRTLSQVEHLNLVKYYGYLEHEDERILIVEYVPNGTLREHLDCIHGEVLDLAARLDIAIDVAHAITYLHMYADHPIIHRDIKSSNILLTENFRAKVADFGFAKLVSDSDLGATHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKLECKERITPKWV* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00334 348 MobiDBLite consensus disorder prediction 97 111 - -
Pte19g00334 348 SUPERFAMILY Protein kinase-like (PK-like) 103 335 IPR011009 -
Pte19g00334 348 ProSiteProfiles Protein kinase domain profile. 128 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00334 348 PANTHER OS01G0750732 PROTEIN 29 336 - -
Pte19g00334 348 MobiDBLite consensus disorder prediction 27 41 - -
Pte19g00334 348 ProSitePatterns Protein kinases ATP-binding region signature. 134 160 IPR017441 GO:0005524
Pte19g00334 348 Gene3D Phosphorylase Kinase; domain 1 89 205 - -
Pte19g00334 348 MobiDBLite consensus disorder prediction 1 41 - -
Pte19g00334 348 SMART serkin_6 128 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00334 348 Pfam Protein kinase domain 133 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00334 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Pte19g00334 348 MobiDBLite consensus disorder prediction 78 111 - -
Pte19g00334 348 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 2 88 205 - -
Pte19g00334 348 Gene3D Transferase(Phosphotransferase) domain 1 206 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00334 Pte-Chr19 2561884 2564895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00334 20 334 Receptor kinase-like Gene Family AT1G79620 43.671 1.52e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pte19g00334 Pkinase 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00334 - - jre:109002055 501.516