Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00329 ATGTCTGTCTATGATGCAGCTTTTGTGGACACAGAGCTATCGAAGAAGACATCCATATTCGGACTTCGTCTTTGGGTTGTTATTGGAATCCTGGTTGGTTCTGTTATTGTTCTTTCTCTCTTCGTGCTTTCTCTGTGTCTCACCTCTCGCCGACAACGTCATAAAAGCACAAACAAGAAACTATCAGACGCACATGATTCTATAACCCCCGTGATTTCTAAAGAAATCCAGGAGATCGTCCACATCCCAGCTCCCAATCACCATCACCCACCACCTTTACCAGAGATTCAAGTTGATATAGGGAAGCCTGAGCACAGGGTTGTCGTTTACTCCGATCGGATTTCAAGTGGGGAGAGCAGGGGAACTGTTAGTGCATGCGAGACGGCGTCGTCTTATGCCAGTGGGAGTGTGGGACCTGAGGTTTCACATCTTGGGTGGGGCAGATGGTACACTTTGAGAGAACTGGAGGCTGCAACTAATGGACTTTGTGAAGAGAATGTAATTGGGGAAGGTGGATATGGGATTGTTTATCGTGGAGTACTCGCTGATGGTACCAGGGTTGCTGTCAAAAACTTATTGAACAACAGGGGTCAAGCTGAGAGGGAGTTCAAAGTAGAGGTGGAAGTAATTGGTCGTGTGAGGCACAAGAACCTAGTGAGATTGCTTGGGTACTGTGTTGAGGGTGCCTACAGGATGCTTGTCTATGAGTATGTCGATAATGGAAATCTTGAACAATGGCTTCATGGGGATGTTGGAGATGTAAGCCCTCTGACATGGGATATCCGAATGAACATTATTTTGGGAACTGCGAAAGGATTAGCCTATCTTCATGAAGGACTTGAGCCAAAGGTTGTTCATCGAGATGTGAAATCAAGCAACATTCTCCTTGATCGCCTATGGAATCCTAAGGTCTCTGATTTTGGGCTTGCCAAGCTCTTGTGTTCAGAGAGGAGTTATGTCACAACTCGAGTAATGGGAACGTTTGGTTATGTTGCCCCTGAGTATGCCTGCACTGGGATGCTTACTGAGAAGAGTGATGTCTACAGTTTCGGCATTTTTATCATGGAGCTAATTTCTGGAAGAAGCCCTGTTGATTACAGTAGACCTCGTGGAGAGGTTGATTTACAGCCACTGTTTGAACCTTTTTTCATCGAGCAAAATATCTACTTAGTACTTCAAATCAGGATGGGTGCTGATTTGATATTCCATGCTTCAAAATATTGA 1224 0.4502 MSVYDAAFVDTELSKKTSIFGLRLWVVIGILVGSVIVLSLFVLSLCLTSRRQRHKSTNKKLSDAHDSITPVISKEIQEIVHIPAPNHHHPPPLPEIQVDIGKPEHRVVVYSDRISSGESRGTVSACETASSYASGSVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYRGVLADGTRVAVKNLLNNRGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGDVSPLTWDIRMNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRLWNPKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGIFIMELISGRSPVDYSRPRGEVDLQPLFEPFFIEQNIYLVLQIRMGADLIFHASKY* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00329 407 SUPERFAMILY Protein kinase-like (PK-like) 141 384 IPR011009 -
Pte19g00329 407 CDD STKc_IRAK 168 369 - -
Pte19g00329 407 FunFam Putative receptor-like serine/threonine-protein kinase 238 398 - -
Pte19g00329 407 ProSitePatterns Protein kinases ATP-binding region signature. 168 190 IPR017441 GO:0005524
Pte19g00329 407 ProSiteProfiles Protein kinase domain profile. 162 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00329 407 Gene3D Phosphorylase Kinase; domain 1 141 237 - -
Pte19g00329 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Pte19g00329 407 SMART serkin_6 162 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00329 407 FunFam Probable serine/threonine-protein kinase At1g01540 142 237 - -
Pte19g00329 407 PANTHER OS01G0323000 PROTEIN 8 376 - -
Pte19g00329 407 Gene3D Transferase(Phosphotransferase) domain 1 238 400 - -
Pte19g00329 407 Pfam Protein kinase domain 165 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00329 Pte-Chr19 2477599 2482033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00329 134 375 Receptor kinase-like Gene Family AT4G02010 51.429 8.23e-82 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pte19g00329 Pkinase 5.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00329 - - rcu:8286672 618.231