Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00326 ATGGTGTCCGTGAATCCAAATCCAGCTCAGGGCTTTCACTTCTTCGATCCCATGAATATGGGTCTTCCAGGTATGAATACGTACCCCCCTTACATGGCACCGGCTGCTCCTGCTAATCCTGCTCTGAGTTGCAACTCTGTGGCGTCGACGGCGGGGGCCAATAGTATGACTGCTGTGCCGGAGGATCAGAGTAAGAAAGTCCGGAAACCGTATACGATTACGAAGTCTAGAGAGAGCTGGACGGAGCAGGAACATGACAAGTTTCTAGAAGCTCTTCAATTATTTGATCGGGACTGGAAGAAGATCGAAGCATTTGTGGGGTCTAAGACAGTAATCCAGATACGCAGCCATGCACAAAAATATTTTTTGAAGGTGCAGAAGAGTGGAACAAGTGAACGCGTACCACCTCCTCGGCCAAAGAGAAAAGCTGCTCATCCATACCCACAAAAAGCCCCAAAAGGTCCTTCCGTATCACAAGTTACCGTTCCAGCAGCATTCGTTGAACCAACATATTTTTATGGGCCAGAATCATTGTCTGCTCAAGTTAGGACAGTGACAAATATGCCTATGCCCTCTTGGAGCTATAAGGCCATGCCACCAGTCAATGTTCCTCAGCCAACAAAAGATGACATGGTGTCAGGAACACTAGTTGGAACAAACAATTGTTGCTGCAGTAGCAGTAACGAGAGCACTCAAACAACTCGATCAGCTGGGCAAAGGTCAGACCATGGGAACTATCCCAAGAAGATGAAAGGGATACCTGATTTTGCTCAAGTTTACAGTTTTATTGGAAGTGTATTTGACCCTAATGCCACTGGTCAGCTGCAAAAACTGAAGCAGATGGATCCTATAAATGTGGAAACAATATTGTTGTTGATGAGGAATCTCTGCGTTAATTTACTGAGTCCTGAATTTGAAGATCATAGGAAAGTACTCTCTTCATATGATACCAACTTTGAAAAGGCAAAATCTGGAAGCCCTTTCAGGATTTCTCACAACGATAAACCGGAGTCATCTGTGGTTCTATCTGCTTGA 1035 0.4512 MVSVNPNPAQGFHFFDPMNMGLPGMNTYPPYMAPAAPANPALSCNSVASTAGANSMTAVPEDQSKKVRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSERVPPPRPKRKAAHPYPQKAPKGPSVSQVTVPAAFVEPTYFYGPESLSAQVRTVTNMPMPSWSYKAMPPVNVPQPTKDDMVSGTLVGTNNCCCSSSNESTQTTRSAGQRSDHGNYPKKMKGIPDFAQVYSFIGSVFDPNATGQLQKLKQMDPINVETILLLMRNLCVNLLSPEFEDHRKVLSSYDTNFEKAKSGSPFRISHNDKPESSVVLSA* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00326 344 PANTHER SWI/SNF COMPLEX-RELATED 51 301 - -
Pte19g00326 344 SUPERFAMILY Homeodomain-like 71 127 IPR009057 -
Pte19g00326 344 MobiDBLite consensus disorder prediction 126 157 - -
Pte19g00326 344 Gene3D - 80 127 - -
Pte19g00326 344 MobiDBLite consensus disorder prediction 224 247 - -
Pte19g00326 344 SMART sant 76 124 IPR001005 -
Pte19g00326 344 ProSiteProfiles SANT domain profile. 75 126 IPR017884 -
Pte19g00326 344 MobiDBLite consensus disorder prediction 325 344 - -
Pte19g00326 344 CDD SANT 79 122 IPR001005 -
Pte19g00326 344 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Pte19g00326 344 FunFam protein REVEILLE 6 isoform X1 79 127 - -
Pte19g00326 344 Pfam Myb-like DNA-binding domain 77 122 IPR001005 -
Pte19g00326 344 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
Pte19g00326 344 MobiDBLite consensus disorder prediction 224 241 - -
Pte19g00326 344 NCBIfam myb-like DNA-binding domain, SHAQKYF class 75 124 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00326 Pte-Chr19 2462194 2466688 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte19g00326 Myb_DNA-binding 2.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00326 - - tcc:18614082 399.823