Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00322 ATGGAAGATGATTGGGATCTTAACGCTGTTGTCAGAGGCTGCACCACTACTCTTGCTTCTACATCCATCGTAACCCCCACAACAGCTTCCTCCTCTGCACCATCAAATTGTTTTAGGATAAACTATCAGCCTGCTGCTACGTCTGGATTCCCTACTGCTTTTGATGTTGGACTAGAAAACCAAAAGTTTTCTCTGTCAGATCCCTTTCAATCAAGAAACAGTTCTGAAGAATTGCATGAATTGTATAAGCCTTTTTTCCGGCTCAAATCACAGTCTCTCACCAATAAAGCCTCAACCTCGACTTTTTCTTCTTTCTCTTACAACACTGCACCCACAGTAGCTGAAGTACAACAAAAGCAAAAATTGCATTCCCCTAATACACAGTCTGGTACCACCCCAAGATCCAAAAGAAGGTGCATGATTCGACAATTCATCTTCTCTTCTTTTGCACTTTCACGACTTCTATATCATCTCATTGGGATACGTCTTTTGTTTGTTTGTTTGTTTGTTTATGTTTTCAACAGAAAGAACCAACGCAAAAAAGTCTGTCAAGTACCAGCTGAGGCTTTATCTGCAGATATATGGTCATGGAGGAAATATGGACAAAAACCCATAAAGGGGTCGCCCTATCCAAGAGGATATTACAGGTGCAGCAGCTCAAAAGGGTGCTTAGCTCGTAAACAAGTGGAGAGGAACAGATCCAATCCTGGAATGTTCATAGTCACATACACTGCTGAGCACAACCACCCTGCTCCAACACACAAAAACTCACTTGCTGGTTCCACACGCCAAAAGCTTGTTTCACCCAAAGCAACCAGTGAGGGTGACTCCGATCAAAAGCTGCTGACTAAACCCGCCTTTTCGGTGACTCCAAAAGCAGATGAGGACGAAGTTGTACCCCGTAGTACAATTTCGGAGAGCAAAGAAGACAAGGAAGACTTTTTCGGTGGTGAGGAAGAAGATGGTTTGGGGTTACGTGATATGGAGCTGACAGATGATTTCTTCACGAGCCCCGCTTCCTTTCCCGACCACTTTCCAGCTGTCATGGCTATTTCTTCTTGGATGACAAATGGTACTGCAGCTGCTGCCAGTACCAGTTGA 1101 0.4414 MEDDWDLNAVVRGCTTTLASTSIVTPTTASSSAPSNCFRINYQPAATSGFPTAFDVGLENQKFSLSDPFQSRNSSEELHELYKPFFRLKSQSLTNKASTSTFSSFSYNTAPTVAEVQQKQKLHSPNTQSGTTPRSKRRCMIRQFIFSSFALSRLLYHLIGIRLLFVCLFVYVFNRKNQRKKVCQVPAEALSADIWSWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSNPGMFIVTYTAEHNHPAPTHKNSLAGSTRQKLVSPKATSEGDSDQKLLTKPAFSVTPKADEDEVVPRSTISESKEDKEDFFGGEEEDGLGLRDMELTDDFFTSPASFPDHFPAVMAISSWMTNGTAAAASTS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00322 366 MobiDBLite consensus disorder prediction 116 135 - -
Pte19g00322 366 FunFam WRKY transcription factor 22 175 245 - -
Pte19g00322 366 Pfam WRKY DNA -binding domain 193 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00322 366 MobiDBLite consensus disorder prediction 249 323 - -
Pte19g00322 366 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 311 IPR044810 GO:0003700
Pte19g00322 366 SMART WRKY_cls 191 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00322 366 MobiDBLite consensus disorder prediction 249 279 - -
Pte19g00322 366 Gene3D WRKY domain 175 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g00322 366 MobiDBLite consensus disorder prediction 290 323 - -
Pte19g00322 366 SUPERFAMILY WRKY DNA-binding domain 189 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g00322 366 ProSiteProfiles WRKY domain profile. 186 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00322 Pte-Chr19 2411053 2412484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00322 1 360 WRKY Transcription Factor Family AT4G01250 39.788 1.50e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte19g00322 WRKY 1.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00322 K13425 - cave:132187281 302.753