Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00319 ATGGAAGACCGTGACCCTCAAAACGCTGCACCTTCGGTATTATTGCCATCACAGTCCAACCTCTTAGCACCATTATTCTCTGAAGGACCCTCCTCAATTTTTAACTCAAACCCTATACTTGATCCTCAGGGACTTGCTGATATTGGCTGGAGTACCCTTTTCTCAGATAAATGGCAAACAGCTGGTGGGGTAGGAATTGATGAGCTGATATTGCAAGGTGCTGCTGCAGCTTCACATTCTTCTGCTGTGTTGGGTAATAGCACTGAGAATACTGGAGGTGAGGATTGTCAAGAGGGCAAGCAGAACAGCAAGAAGAAACGTGTCAGATCCAAAAAAGCAAGTCGGCCTAGGTTTGCCTTTCAGACAAGAAGTGCAGATGATATTCTTGATGATGGATATCGATGGAGGAAATATGGACAGAAAGCTGTGAAGAACAACATCTATCCCAGGAGTTACTATCGCTGCACACATCATCCATGCAACGTCAAGAAACAGGTTCAGAGGCTATCTAATGATACAAGCATCGTGGTGACAACCTACGAGGGAATTCACAATCATCCTTGCGAGAAGCTGATGGAAACACTGACACCTATCCTAAAGCAATTCCAGTTTCTCTCTAGATTCTAA 627 0.445 MEDRDPQNAAPSVLLPSQSNLLAPLFSEGPSSIFNSNPILDPQGLADIGWSTLFSDKWQTAGGVGIDELILQGAAAASHSSAVLGNSTENTGGEDCQEGKQNSKKKRVRSKKASRPRFAFQTRSADDILDDGYRWRKYGQKAVKNNIYPRSYYRCTHHPCNVKKQVQRLSNDTSIVVTTYEGIHNHPCEKLMETLTPILKQFQFLSRF* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00319 208 SMART WRKY_cls 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00319 208 ProSiteProfiles WRKY domain profile. 124 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00319 208 FunFam WRKY transcription factor 57 115 189 - -
Pte19g00319 208 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 86 190 IPR044810 GO:0003700
Pte19g00319 208 Gene3D WRKY domain 113 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte19g00319 208 MobiDBLite consensus disorder prediction 84 116 - -
Pte19g00319 208 Pfam WRKY DNA -binding domain 130 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte19g00319 208 SUPERFAMILY WRKY DNA-binding domain 122 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00319 Pte-Chr19 2395800 2397146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00319 94 208 WRKY Transcription Factor Family AT5G41570 68.696 7.49e-56 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte19g00319 WRKY 5.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00319 - - pvy:116141408 217.238