Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00317 ATGTCATCTTTCACAGCCGCCATCCCCACCGGCACGCCACCCCATACACCCACTTACTTCACCAACCTTGGCCTTGGCTACGCCATAGCCATAGCTTTTGGCTTCCTTGTACTTCTCTCTACTCTTCTTCTCTCCTCTTACCTCTGTTGTCGAGCACGCAACCGTTCGATTCAACACGCAACCCCAGATCATTCCAACTCTGAAGGGATCATCCTGCCTCGGATTATCTTTGTTGCTGAAGATGAAGTCAACCAACGAGACGAGGAAAACGCGGTTGTGGGTCTCGAACAGAATGTCATCAATTCTTACCCCAAGTTCTCGTTTAGGAAAGAGTCAGTCGCTGGCAACGACACGACATGTTCGATATGTTTGTGCGAATACAAGGATTCGGAGTTGTTAAGGATGATGCCCGAGTGTCGACACTTCTTTCACCTCTGCTGTATCGATGCTTGGTTGAAGCTCAATGGCTCGTGTCCGGTTTGCCGAAACTCTCCGCTTCCAACGCCGCTGTCCACGCCATTGTCAGAGGTTGTGCCGCTGTCACAGTATTCAGTGGATCGGAGACGTAGGTGA 573 0.5079 MSSFTAAIPTGTPPHTPTYFTNLGLGYAIAIAFGFLVLLSTLLLSSYLCCRARNRSIQHATPDHSNSEGIILPRIIFVAEDEVNQRDEENAVVGLEQNVINSYPKFSFRKESVAGNDTTCSICLCEYKDSELLRMMPECRHFFHLCCIDAWLKLNGSCPVCRNSPLPTPLSTPLSEVVPLSQYSVDRRRR* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00317 190 ProSiteProfiles Zinc finger RING-type profile. 120 162 IPR001841 -
Pte19g00317 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 166 IPR013083 -
Pte19g00317 190 PANTHER RING-H2 FINGER PROTEIN ATL67 11 190 IPR044289 GO:0016567|GO:0016740
Pte19g00317 190 SMART ring_2 120 161 IPR001841 -
Pte19g00317 190 Pfam Ring finger domain 119 162 IPR001841 -
Pte19g00317 190 SUPERFAMILY RING/U-box 99 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00317 Pte-Chr19 2391923 2392495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00317 10 182 C3H Transcription Factor Family AT5G06490 35.385 1.16e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00317 - - qsa:O6P43_027304 258.84