Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00293 ATGGGGAAAAGTGAGGAGGCAAAGTCAGCTAAAGCTGAGAAGCAGTCTTCACCTGCCTCTACGTTTCAGGATCAATCAAAGCAGAATACCCAGGCGAACATTCATTTGTATCCTGATTGGGCAGCGATGCAGGCATATTATGGGCCAAGAGTCACCTTGCCACCATATTATAACTCGGCAGTGCTGTCTGGACACACTCCTCACCCTTACATGTGGGGGCCACCAGAGGCTATGATGTCACCGTATAGGGCTCCTTATGCTGCAATATATCCTCATGGAGGTGTTTATGCGCCCCCTGCAGTTTCTCTTGCTGCTAATCCTCCTAGTACAGAAACTCCTACAAAGTCTTCTGGAAATAATGATCAGGGATCGGTAAAGAAGTTGAAAGGGTTTGATGCTCTTCAGATGACAATAGGCAATGGTAATGGTGAGTACGAGGGTGGAGCTGAACATAAAGTTTCGCAAAGTTTTGACACTGGAGCTTCTAGTGATGGAAGTGATGGAAATACTTCTGGGGCTGATCAACCAACAAGGAAAAGAAGCCGTGAAGAAACAACTAGCACAGATGGGAAGAATGAGATGAATACCAGTCCAGCTTCTGGCAAGGAGGCAGCAACTCCTAACAAGGCAATGGAAGTTGGGGTTGCTGGTGTTCCAGGGAGGCCTGTACTTTCTCCTGGCACGACCACAGCACTGGAGCTCCGAAACAGTTCTACAATCAATGCAAAAACAACTACTATGCCTTCTGATGCTTGGTTACAGAATGAAAGGGAGCTGAAAAGAGAGAGGAGGAAGCAATCTAATCGAGAATCTGCCAGAAGGTCCAGGCTACGAAAGCAGGCTGAAGCTGAAGAACTTGCAAGGAAGGTTGAGTCTTTGACTTCTGAGAATGTCATACTAAAATCCGAAATCAATCGATTGACTGAAAGTTCTGAGAAAATGAGAGCAAAAAATGCAGCTCTAATGGAGAAACTGAAAAATTCACACGTTGGACAAACTGGAGAAATTATTTTGAGCATTGACGACCAGAGGGATACTCCTCCTAGAAGCACAGAAAATCTGCTGTCACGAGTTAATAACAATTCAATGTCTAATGATAGAAGTGCTGATGAAGAGAGCAATGGTTATGAGAAAAAGCCAAACGCTGGTGCAAAGCTGCATCAACTACTGGATACGAGTCCTAGAGCTGATGCTGTTGCAGCTGGATGA 1209 0.4524 MGKSEEAKSAKAEKQSSPASTFQDQSKQNTQANIHLYPDWAAMQAYYGPRVTLPPYYNSAVLSGHTPHPYMWGPPEAMMSPYRAPYAAIYPHGGVYAPPAVSLAANPPSTETPTKSSGNNDQGSVKKLKGFDALQMTIGNGNGEYEGGAEHKVSQSFDTGASSDGSDGNTSGADQPTRKRSREETTSTDGKNEMNTSPASGKEAATPNKAMEVGVAGVPGRPVLSPGTTTALELRNSSTINAKTTTMPSDAWLQNERELKRERRKQSNRESARRSRLRKQAEAEELARKVESLTSENVILKSEINRLTESSEKMRAKNAALMEKLKNSHVGQTGEIILSIDDQRDTPPRSTENLLSRVNNNSMSNDRSADEESNGYEKKPNAGAKLHQLLDTSPRADAVAAG* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00293 402 MobiDBLite consensus disorder prediction 349 369 - -
Pte19g00293 402 MobiDBLite consensus disorder prediction 229 252 - -
Pte19g00293 402 Pfam G-box binding protein MFMR 1 101 IPR012900 -
Pte19g00293 402 MobiDBLite consensus disorder prediction 105 124 - -
Pte19g00293 402 CDD bZIP_plant_GBF1 261 309 IPR045314 GO:0003700|GO:0006355
Pte19g00293 402 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 258 321 IPR004827 GO:0003700|GO:0006355
Pte19g00293 402 MobiDBLite consensus disorder prediction 155 175 - -
Pte19g00293 402 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 263 278 IPR004827 GO:0003700|GO:0006355
Pte19g00293 402 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 372 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pte19g00293 402 Pfam bZIP transcription factor 256 318 IPR004827 GO:0003700|GO:0006355
Pte19g00293 402 Coils Coil 269 324 - -
Pte19g00293 402 MobiDBLite consensus disorder prediction 105 125 - -
Pte19g00293 402 Gene3D - 259 313 - -
Pte19g00293 402 MobiDBLite consensus disorder prediction 13 30 - -
Pte19g00293 402 SUPERFAMILY Leucine zipper domain 259 314 IPR046347 GO:0003700|GO:0006355
Pte19g00293 402 SMART brlzneu 256 320 IPR004827 GO:0003700|GO:0006355
Pte19g00293 402 MobiDBLite consensus disorder prediction 337 402 - -
Pte19g00293 402 MobiDBLite consensus disorder prediction 254 282 - -
Pte19g00293 402 MobiDBLite consensus disorder prediction 155 282 - -
Pte19g00293 402 MobiDBLite consensus disorder prediction 1 30 - -
Pte19g00293 402 Pfam Disordered region downstream of MFMR 121 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00293 Pte-Chr19 2225805 2230999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00293 4 403 bZIP Transcription Factor Family AT2G46270 49.165 3.24e-109 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte19g00293 MFMR_assoc 6.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00293 K09060 - gmx:100781875 492.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte19g00293 19 2225805 2230999 Pte19g00293 19 2225805 2230999 RCT