Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00292 ATGCCGAAGAATAAGGGGAAGGGAGGTAAGAACAGGAAGAGGGGAAAGAATGAGGCTGATGATGAAAAGAGAGAACTTGTTTTTAAGGAAGACGGACAGGAATATGCCCAAGTGCTTCGCATGCTTGGTAATGGTAGATGGAAGCAATGTGCATTGATGGAACAAATTGTCTTTGCCACATTCGGGGTAAGATGCACAAGAAGTATGCGACTCAATGAGATTGGTGCTGGTATGGATGATGAGGATGAAGGTGGTGATGATAATTATGTTGAATTTGAAGATGAAGATATTGATAAGATCTAA 303 0.4125 MPKNKGKGGKNRKRGKNEADDEKRELVFKEDGQEYAQVLRMLGNGRWKQCALMEQIVFATFGVRCTRSMRLNEIGAGMDDEDEGGDDNYVEFEDEDIDKI* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00292 100 Gene3D - 2 57 IPR012340 -
Pte19g00292 100 MobiDBLite consensus disorder prediction 76 100 - -
Pte19g00292 100 SUPERFAMILY Nucleic acid-binding proteins 2 70 IPR012340 -
Pte19g00292 100 PANTHER EIF-1A 1 49 IPR001253 GO:0003743|GO:0006413
Pte19g00292 100 MobiDBLite consensus disorder prediction 1 25 - -
Pte19g00292 100 MobiDBLite consensus disorder prediction 78 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00292 Pte-Chr19 2221700 2222949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00292 1 101 Eukaryotic Initiation Factors Gene Family AT2G04520 47.945 2.20e-26 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00292 K03236 - cpap:110808815 104.375