Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00279 ATGGGGAAACCCCGGTACACTCATGAAGATGACCTCCCCACCACCACTACCGCAGCAATCTCCACCACCGAAAAATCCATCGGACCCATCACTCTAATCGCCGTTGATCCTGATTCGAAGCCAGATAATGCCCCACAAAATGGTACACGCCATCCTGTATATCGTGGTGTTCGGAAGCGGAGATGGGGCAAATGGGTCTCTGAAATCAGAGAACCTCGCAAGAAATCACGCATATGGCTCGGTTCTTTTCCGATACCGGAGATGGCAGCCAAGGCGTATGATGCCGCAGCTTACTGCTTAAAAGGTAGAAAAGCTCTACTCAATTTTCCAGACGAAGTAGAAAACTTGCCAAGGCCTTCTTCTTCTGCAGCTAGAGATATTCAAGCAGCTGCAGCTGAGGCAGCACAGACGATGAAGACTACTGCTATTACAAGTGCCACCGTGACTGTAAGCACATGCACAAGCTCAAGTGCTGTGTCCTCCAATGTCAGCAGCAAGAGTGACATCAGTCTCACCGTTGGCAATCATGACGAAGAAGATGACTTTTGGGGTGAGATTGAATTGCCTGAGCTGAAGATGAACAAAGGGTGTCAATGGAATTCATGTGGATCGTTGGCTTTTCCAGGAGACGTCACGGTGTTGCTGCAAGACGGTGAGGTTCATCAGCAACAGTACATGGCGTGTCTGTAA 690 0.4928 MGKPRYTHEDDLPTTTTAAISTTEKSIGPITLIAVDPDSKPDNAPQNGTRHPVYRGVRKRRWGKWVSEIREPRKKSRIWLGSFPIPEMAAKAYDAAAYCLKGRKALLNFPDEVENLPRPSSSAARDIQAAAAEAAQTMKTTAITSATVTVSTCTSSSAVSSNVSSKSDISLTVGNHDEEDDFWGEIELPELKMNKGCQWNSCGSLAFPGDVTVLLQDGEVHQQQYMACL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00279 229 Gene3D AP2/ERF domain 53 111 IPR036955 GO:0003700|GO:0006355
Pte19g00279 229 SUPERFAMILY DNA-binding domain 53 112 IPR016177 GO:0003677
Pte19g00279 229 PRINTS Ethylene responsive element binding protein signature 92 112 IPR001471 GO:0003700|GO:0006355
Pte19g00279 229 PRINTS Ethylene responsive element binding protein signature 54 65 IPR001471 GO:0003700|GO:0006355
Pte19g00279 229 Pfam AP2 domain 52 102 IPR001471 GO:0003700|GO:0006355
Pte19g00279 229 FunFam Ethylene-responsive transcription factor 2 52 111 - -
Pte19g00279 229 MobiDBLite consensus disorder prediction 1 23 - -
Pte19g00279 229 CDD AP2 54 111 IPR001471 GO:0003700|GO:0006355
Pte19g00279 229 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 40 195 - -
Pte19g00279 229 SMART rav1_2 53 116 IPR001471 GO:0003700|GO:0006355
Pte19g00279 229 ProSiteProfiles AP2/ERF domain profile. 53 110 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00279 Pte-Chr19 2124238 2125229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00279 49 230 AP2-EREBP Transcription Factor Family AT1G01250 56.044 1.75e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte19g00279 AP2 1.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00279 K09286 - tcc:18613963 205.682