Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00263 ATGATTGTTCACAAACTAGTTTTCCTCTCAATTTTCGGGTTTTGCACACTATGGTTAATCAGAATTCTTCTGTTCAAAACTGGGTTGATTTACAAGGTCAAAAAACAATGGACTGCAATCCAAAATTGTTTCCATGTTTACCAATCTTTCAAAGTCCCAGAATTCAATCAAAACATCCAACAGAATCAGCTCTACAAAAAAGTCTCTTTGTACCTTCACTCCCTCCCTTCTGTTGAAGACTCAGACTTCACCAACCTTGTTGCCGGTAAGAAAGCACAAGACATCGTCTTGTCCCTGGAACCCAACCAGACAGTGGAAGACAACTTCCTCGGGGCTAGAGTCTATTGGCTAAACCAACAACGACAACAACAGGATTCGAACGACAACAGTCAGAGCCGAAGAACGTGGATACTCCGAATTAGGAAAGCTGACAAACGTCGCATTCTCCGACCTTACCTCCAACACATCCACACAGTTGCTGATGAAATCGAACAAGGTAATCGAGATACGAAGCTTTACATGAACATCAATAGTGGTCAATGGAAATCCGTGGGTTTCACTCATCCATCCACGTTTGAAACCATGGCTATGGAGGGTGACCTCAAGAACAAAATCAAATCCGACCTTGAAGCGTTTCTCAAAGCCAAGCAATACTATAACAGACTGGGTCGTGCTTGGAAACGAAGCTTCTTGTTGTACGGTCCATCTGGGACTGGGAAAACGAGTTTCATAGCTGCCATGGCAAATTTCTTGTCCCACGACGTATACGACATCGATCTCTCCAAGGTTATCGATGATTCAGAGCTGAAGCTGTTGATTTTGCAGACAACATCGAAATCGATCTTGGTAATCGAAGATCTCGATCGGTTCTTGATGGAGAAACCAACGGCTGTGAGCTCATCAGGTATACTGAATTTCATGGATGGCTTGTTGAATTCTTGTTGTGTTGAGGAGAGAATCATGGTGTTCACGATGAATAACAAGGACCACGTTGACCCGACCATGTTGAGACCGGGACGGGTGGATGTCCATATCCATTTTCCGTTATGTGATTTTATGGCGTTTAAGAGTTTGGCCAATAGTTATTTGGGAGTGAGGGAGCACAAGCTTTTCCCACAGGTTCAAGAGATGTTTCAAACCGGGGCGAGTTTGAGTCCGGCCGAGATTGGCGAGTTGATGTTGGTGAACCGGAGCTCGCCGAGTCGGGCCATTAAGTCGGTTATCTGTGCTCTTCAAACGGACGGTGATGGTCGGGGGACTGGGAAAATTGGACGGAGATTATCTGATCACGTGGCGATGAGTGAACCGGGTTCGGGTGGCGGGATGGGGAGTGAAGGTTTGAACCCGGTGAAGGATTTAAAGAAACTGTACGGTTTCTTGAGAATGAGAAGTTGTAATTGGAAATCTCAATCGTTGGATGGAAGCTCAAGTCCAAAGCAAGGGTGA 1446 0.4537 MIVHKLVFLSIFGFCTLWLIRILLFKTGLIYKVKKQWTAIQNCFHVYQSFKVPEFNQNIQQNQLYKKVSLYLHSLPSVEDSDFTNLVAGKKAQDIVLSLEPNQTVEDNFLGARVYWLNQQRQQQDSNDNSQSRRTWILRIRKADKRRILRPYLQHIHTVADEIEQGNRDTKLYMNINSGQWKSVGFTHPSTFETMAMEGDLKNKIKSDLEAFLKAKQYYNRLGRAWKRSFLLYGPSGTGKTSFIAAMANFLSHDVYDIDLSKVIDDSELKLLILQTTSKSILVIEDLDRFLMEKPTAVSSSGILNFMDGLLNSCCVEERIMVFTMNNKDHVDPTMLRPGRVDVHIHFPLCDFMAFKSLANSYLGVREHKLFPQVQEMFQTGASLSPAEIGELMLVNRSSPSRAIKSVICALQTDGDGRGTGKIGRRLSDHVAMSEPGSGGGMGSEGLNPVKDLKKLYGFLRMRSCNWKSQSLDGSSSPKQG* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00263 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 409 IPR027417 -
Pte19g00263 481 Pfam Domain associated at C-terminal with AAA 33 117 IPR025753 -
Pte19g00263 481 SMART AAA_5 226 351 IPR003593 GO:0016887
Pte19g00263 481 Pfam ATPase family associated with various cellular activities (AAA) 231 349 IPR003959 GO:0005524|GO:0016887
Pte19g00263 481 Gene3D - 182 349 IPR027417 -
Pte19g00263 481 PANTHER BCS1 AAA-TYPE ATPASE 38 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00263 Pte-Chr19 2015543 2017769 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00263 222 347 Calmodulin-binding Proteins AT3G56690 29.078 2.18e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00263 - - qsa:O6P43_018558 687.182