Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00260 ATGACCACCGACATAGATAAACTCTGGGTCTTCGCTCTGGTCTTGAAATCAAATGCTTTCACCAAAGAAAACGTTGCATGGTCTCTTCTGATCGTTGCCATCATCTGGTTAATCCTGACGACCTTGCTTTATTGGTCTCACCCAGGAGGTCCAGCTTGGGGCAAATACTACCATACCTGGAGAAGCCGTTCCAACTCAGATACCGCTCCTGTCTTCACCGAGAAGAAAATTATTCCAGGCCCCAATGGGTGGCCTCTATTTGGTAGCATGAACCTTATGTTCTCACTTGCTCATCATCGTATAGCACAAGCAGCAAAAGCATGCAAAGCTACGAGACTCATGGCCTTCAGCTTAGGTGAAACACGTGTGATAGTCACGTGCCACCCTGACGTCGCCAAAGAAATCCTCACCAGTTCTGTGTTTGCTGATCGTCCGGTGAAGGAGTCAGCTTACAGCTTAATGTTCAGCAGAGCAATTGGCTTTGCTCCTTATGGGGTTTATTGGAGAAGCCTGCGTAGAATCGCAGCGACTCATCTCTTTTCTCCTAAGCAAATCAAAGCCTCTGAGTTCCAAAGGTCTGAAATCGCTTCAGAAATGGTCGAGTTGTTTCGAAAACGCCGTAACAATCTGCGTGTTCGTGAAGTACTCAAGACAGCATCGCTAAATAACATGATGTGTTCAGTTTTCGGTCGACGCTATGAGCTGAACTCTAATGAAAATGAATTGGAAGACATCAGAGAACTCGTTGATGAAGGTTACGACTTATTAGGTATTCTGAATTTTGGAGACCATCTGCCTTGGCTTGCAGATTTGGATGCCCAGAAAATCCGGTTTAGGTGTTCTAAACTCGTCCCAAAAGTGAACCGGTTCGTGAGCCGGATCATAGATGAACGTAGAGTCAAAACGACCTACGCCAGCTCTGATTTCCTTGACGTTTTGCTGTCTATACAAGGTCCTGATAAATTATCCGACTCTGACACGGTTGCCGTTCTCTGGGAAATGATATTTAGAGGGACTGACACCGTGGCAATTCTGATCGAGTGGATATTAGCGAGGATGGTGCTGCATCCTGGCGTTCAGTCAACGGTTCACGATGAGCTAGACAGCGTTGTCGGAAGATCACGTACCGTAACTGAGTCTGACGTGTCCTCCTTGGTGTATCTAACGGCGGTGGTGAAGGAAGTACTGAGGCTCCATCCACCGGGCCCACTATTGTCCTGGGCCCGTTTGGCAATCACAGATACAACTATTGATGGGTATCACGTACCGGCTGGGACCACAGCAATGGTTAACATGTGGGCCATCTCGCGGGCCCCAGATGTGTGGGTGGACCCTCTCGAATTTATACCCGAGAGATTCGCGAGTATAGAAGGGGAAGCGGGGTTTTCTATTTTCGGATCGGATCTTAGGCTAGCTCCGTTCGGTTCGGGTAGACGGACTTGCCCCGGTAAAACATTGGGCTTTGCGACGGTGACGTTTTGGGTAGCTTCGCTACTACATGAGTTTGAATGGTTAGCTTGTGACCAGAGTGAAGTTGACCTATCTGAGGTTTTAAAGCTATCTTGTGAGATGTCCAAGCCTTTGATGGTTAACGTGCACCCAAGGCGTATCTGA 1614 0.4802 MTTDIDKLWVFALVLKSNAFTKENVAWSLLIVAIIWLILTTLLYWSHPGGPAWGKYYHTWRSRSNSDTAPVFTEKKIIPGPNGWPLFGSMNLMFSLAHHRIAQAAKACKATRLMAFSLGETRVIVTCHPDVAKEILTSSVFADRPVKESAYSLMFSRAIGFAPYGVYWRSLRRIAATHLFSPKQIKASEFQRSEIASEMVELFRKRRNNLRVREVLKTASLNNMMCSVFGRRYELNSNENELEDIRELVDEGYDLLGILNFGDHLPWLADLDAQKIRFRCSKLVPKVNRFVSRIIDERRVKTTYASSDFLDVLLSIQGPDKLSDSDTVAVLWEMIFRGTDTVAILIEWILARMVLHPGVQSTVHDELDSVVGRSRTVTESDVSSLVYLTAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAISRAPDVWVDPLEFIPERFASIEGEAGFSIFGSDLRLAPFGSGRRTCPGKTLGFATVTFWVASLLHEFEWLACDQSEVDLSEVLKLSCEMSKPLMVNVHPRRI* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00260 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Pte19g00260 537 PANTHER CYTOCHROME P450 78A7-RELATED 1 536 - -
Pte19g00260 537 SUPERFAMILY Cytochrome P450 78 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 FunFam Cytochrome P450 78A5 71 535 - -
Pte19g00260 537 Pfam Cytochrome P450 79 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 Gene3D Cytochrome P450 71 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS E-class P450 group I signature 346 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS E-class P450 group I signature 219 237 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS E-class P450 group I signature 431 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS E-class P450 group I signature 326 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS E-class P450 group I signature 389 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS P450 superfamily signature 337 354 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS P450 superfamily signature 390 401 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte19g00260 537 CDD CYP78 109 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00260 Pte-Chr19 1994296 1996579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00260 1 536 Cytochrome P450 AT2G46660 66.976 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00260 K20619 - qsa:O6P43_018550 797.349