Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00259 ATGGAGGGTAAGGACACCCACACACAGCGTAGGACCCTAATTTCTAAAGAGAATATGGGGAGTGGAGATAAAAGTTTAAAGGGTTTCCATCTGCACCTGCCTCATCTTCATCATCATCATTACCAGGAGAAGAAGCAAGTTTTCAGGGATGTACCAAAGGGGTGTTTGGCAATCAAAGTAGGACAAGGAGAATATCAGCAAAGGTTTGTGGTGCCTGTATTGTACTTCAATCACCCGCTGTTCATGCAGCTGTTGAAAGAGGCTGAAGAAGAGTATGGGTTTGATCAAAAAGGTACCATTACAATCCCCTGCCATGTTGAGCAGTTTAGGTACGTCCAAGGCATGATTGATAGGGAGAAGTCCCTACATCACCACCACCACCATCTTCATGTTGGTTGCTTTGGGTTTTAA 411 0.4453 MEGKDTHTQRRTLISKENMGSGDKSLKGFHLHLPHLHHHHYQEKKQVFRDVPKGCLAIKVGQGEYQQRFVVPVLYFNHPLFMQLLKEAEEEYGFDQKGTITIPCHVEQFRYVQGMIDREKSLHHHHHHLHVGCFGF* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00259 136 MobiDBLite consensus disorder prediction 1 22 - -
Pte19g00259 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 39 111 IPR003676 GO:0009733
Pte19g00259 136 Pfam Auxin responsive protein 45 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00259 Pte-Chr19 1965323 1966558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00259 50 128 Calmodulin-binding Proteins AT5G20810 48.750 2.03e-19 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00259 K14488 - cave:132187600 176.407