Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00258 ATGAAAGCAAGTAAAGACCGAACCCGAACCCATGTAGGTAAGAAGTATGAGATGGGGAAAACTTTAGGTCACGGTAGCTTCGCGAAAGTGAAGTTCGCCAGGAACGTTGAGACTGGACAAAGCTTTGCCATCAAAATTCTTGATCGTCATCTTCTCTTACGCCACAAAATGGTCAACCAGATAAAGAAAGAGATATCAACGATGAAGATGATCAAACATCCAAATGTCATCGAAATATTTGAGGTGATGGCTAGCAAAACAAAGATATACATTGTACTAGAGTTTGTTGATGGTGGAGAACTATTTGACATAATATCAAGGCACGGAAAACTCACAGAAGACGAAGCAAGGAAATATTTCCAGCAGCTCATCAATGCTGTAGATTACTGCCACAGCAGAGGCGTGTACCACAGGGATTTGAAGCCTGAGAATCTTCTTTTGGACTCGAGTGGTAGTCTTAAAGTATCTGATTTTGGATTGAGTACATTCTCACAGCAAGTAAGGAATGATCCTTTCTGGTGA 522 0.41 MKASKDRTRTHVGKKYEMGKTLGHGSFAKVKFARNVETGQSFAIKILDRHLLLRHKMVNQIKKEISTMKMIKHPNVIEIFEVMASKTKIYIVLEFVDGGELFDIISRHGKLTEDEARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDSSGSLKVSDFGLSTFSQQVRNDPFW* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00258 173 ProSiteProfiles Protein kinase domain profile. 16 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00258 173 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Pte19g00258 173 FunFam Maternal embryonic leucine zipper kinase 5 170 - -
Pte19g00258 173 Gene3D Transferase(Phosphotransferase) domain 1 6 171 - -
Pte19g00258 173 Pfam Protein kinase domain 16 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00258 173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Pte19g00258 173 FunFam Non-specific serine/threonine protein kinase 6 95 - -
Pte19g00258 173 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 163 - -
Pte19g00258 173 SMART serkin_6 16 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00258 173 SUPERFAMILY Protein kinase-like (PK-like) 13 165 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00258 Pte-Chr19 1961744 1963235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00258 8 170 CBL-interacting serine-threonine protein kinases AT1G01140 76.074 1.63e-87 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte19g00258 Pkinase 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00258 - - egr:104443329 271.552