Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00247 ATGGAAGCACAAAATTCTCAACATGCTCAAATTATTGAAATCAATGCTGATATTCCTGGTGGGCCGAGCTTTGTCAGACGGAGTAAGATATGTGGAGAAGCACCATGTGGTTTTGCTGATGCAGGGTCTGTCTCTAAGGATGCAAAAGAACGAACAAATGCAATGCGCAAGCTTATAATAGCTGTTGTACTTTGTGTTATTTTCCTGAGCGTTGAAGTATTTGGTGGCATAAAAGCCAATAGTCTGGCGATATTAACTGATGCAGCACACCTCCTTTCAGATGTTGCAGCTTTTGCAATATCTTTGTTCTCCTTATGGGCTGCAGGCTGGGAAGCAACTCCCCGTCAGTCCTATGGTTTTTTCAGGATAGAGATTCTAGGTGCTCTGGTTTCCATCCAACTCATTTGGTTGCTTGCTGGGATTCTTGTATATGAAGCCATTCAAAGGCTCATTAATGATATGGGTGAGGTCAATGGCTTTCTAATGTTTGCTGTCTCTGCATTTGGACTTTTAGTTAATATTGTCATGGCTGTATTATTGGGCCATGATCATGGCCATATACACGGTGGACATGAGCATGGCCATTGCCATGGAGTGACTATGTCTACTCATCATCAAAATCAACATCATTCTCCTCATGATTTGGTGCAAGAAAGTGGAGAGCACTGTCATAGCCATGAAGATGACAAGCACCATCATTCCCATCAAGATCTTGATCACCCCTTACTAGACAGTCCAATTGGCGGACATAAAGAGGAGGAACGAAATATAAATGTGCATGGAGCTTATCTCCATGTTCTCGGGGACTCCATTCAGAGCATTGGGGTAATGATTGGTGGTGCAGTCATATGGAATAAGCCAGAGTGGAAGATTGTTGATTTGATTTGTACCCTAATATTTTCAATCATCGTTCTTGGAACCACGATCAACATGCTCCGAAGCATAATTGAAGTTTTGATGGAAAGCACACCAAGAGAGATTGATGCCACGAAGCTTGAAAAGGGTCTCCTGGAGATGGATAAAGTGGTTGCGGTTCATGAGCTGCATATATGGGCCATCACAGTTGGAAAGGTACTTTTGGCATGTCACATTAAAGTCTCGCCTGAAGCAGATGCAGACTTGGTGCTGGACAAGGTAATAGATTACATTAGAAGGGTGTATAATATCAGTCATGTAACAATCCAGATAGAGCGTTAA 1197 0.4252 MEAQNSQHAQIIEINADIPGGPSFVRRSKICGEAPCGFADAGSVSKDAKERTNAMRKLIIAVVLCVIFLSVEVFGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPRQSYGFFRIEILGALVSIQLIWLLAGILVYEAIQRLINDMGEVNGFLMFAVSAFGLLVNIVMAVLLGHDHGHIHGGHEHGHCHGVTMSTHHQNQHHSPHDLVQESGEHCHSHEDDKHHHSHQDLDHPLLDSPIGGHKEEERNINVHGAYLHVLGDSIQSIGVMIGGAVIWNKPEWKIVDLICTLIFSIIVLGTTINMLRSIIEVLMESTPREIDATKLEKGLLEMDKVVAVHELHIWAITVGKVLLACHIKVSPEADADLVLDKVIDYIRRVYNISHVTIQIER* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00247 398 NCBIfam cation diffusion facilitator family transporter 55 398 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pte19g00247 398 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 5 398 - -
Pte19g00247 398 MobiDBLite consensus disorder prediction 207 240 - -
Pte19g00247 398 MobiDBLite consensus disorder prediction 201 240 - -
Pte19g00247 398 Gene3D Cation efflux protein transmembrane domain 54 319 IPR027469 -
Pte19g00247 398 SUPERFAMILY Cation efflux protein transmembrane domain-like 53 321 IPR027469 -
Pte19g00247 398 Pfam Cation efflux family 58 320 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Pte19g00247 398 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 326 397 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00247 Pte-Chr19 1892968 1896592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00247 1 399 Inorganic Solute Cotransporters AT2G46800 68.159 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00247 K14689 - vvi:100259043 572.007