Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00244 ATGGAGATCATAGAAGAATCGAAGAATTACTCTGACAAAGAAGAAGAGGAGGAAGAAGATATGATCATTAGAGAAGAGAGGTTCTCACACCAAGATGCACCGTCAATAAATTTCAACACTAATATAGACCTCATGGACTTATCACTTGGAAACAAAGACATTGATGAAACAGCAGTTTTAATTCATGGAGGTGGTTGTAGTAGCACTATCGCCGTTGGAGCAAGCGGGAGTGGTAGCAGCGGCCATGGCGCTAATTACAATTATAGCATTAGCAGTGGTCATGAATCAATCGAGAAGGAGCATATGTTTGACAAGGTGGTGACTCCAAGTGATGTTGGCAAGCTCAACCGCCTAGTGATACCGAAGCAACATGCTGAAAAGTACTTCCCTCTTGACTCTTCAAGCAACGACAAAGGGTTGCTTTTGAATTTCGAAGATAGGAACGGCAAGTCATGGAGGTTCAGGTACTCTTACTGGAACAGTAGTCAGAGTTATGTGATGACCAAAGGTTGGAGTCGTTTTGTGAAGGAGAAGAAGCTTGATGCTGGAGATATTGTCTCGTTTCAGCGCGGAGTTGGTGACTTGCATAAACATCGTTTGTTCATAGATTGGAGGAGAAGAACTGATCATCATGGACCTGATCATGCTGCTGCTGGTATTATGTCACCTCTCTTGATTCCAAATCACCCTCATTTGCCTCAATACTCAATTAGATGGAGTGGAAAGCTGTATTCACTGCCTCAGCCGTTGTCTATGTCCCGGCATCCCCATGAACATATGCAGCAAATGGGTTACAATTTTCACCCGTACTACCACCACCATCAACAGCCACAACAGCATCATTGCCATCATTCTCATGGCAGTGGTTGTAGATTCAATGAGGTGAATTCATCTCAGTCACTCTATTGTTTCAATTCACCTGTTTCACCTCGTCTTCAAAATCAACCAGTACGACCGGATGGTGGAGAGGCTCCAATGGTGATTGATTCTGTTCCAATTGCTCAGCATTATGGTAAGGCCACTTCTAAAAAGCTTCGACTATTTGGGGTGAATATGGAGTGTTCCTCATCAGCAGATGAAGAACCAAGATGTCACATATTGTCCTCAACTGTAGTACCACCTCATATGAATGTGACAATGTCTCCCAATTCAGTCCCACCGCATCATCTTCCCTCCTCCGCTCACTTACCACTTCAGTTGAGGTTACCTCATGGCGGTGCTACAACAATGGCATCATCTTATAACCAAGCAAGATTTCAGGAGAAAGGGGAAAGTTCTATGCCTTTCGATTTGGATGCTTCGACGAAGTATTTTCGGTGA 1320 0.4386 MEIIEESKNYSDKEEEEEEDMIIREERFSHQDAPSINFNTNIDLMDLSLGNKDIDETAVLIHGGGCSSTIAVGASGSGSSGHGANYNYSISSGHESIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNDKGLLLNFEDRNGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGDLHKHRLFIDWRRRTDHHGPDHAAAGIMSPLLIPNHPHLPQYSIRWSGKLYSLPQPLSMSRHPHEHMQQMGYNFHPYYHHHQQPQQHHCHHSHGSGCRFNEVNSSQSLYCFNSPVSPRLQNQPVRPDGGEAPMVIDSVPIAQHYGKATSKKLRLFGVNMECSSSADEEPRCHILSSTVVPPHMNVTMSPNSVPPHHLPSSAHLPLQLRLPHGGATTMASSYNQARFQEKGESSMPFDLDASTKYFR* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00244 439 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 37 360 IPR044800 GO:0003700
Pte19g00244 439 SMART B3_2 103 208 IPR003340 GO:0003677
Pte19g00244 439 FunFam B3 domain-containing protein 96 217 - -
Pte19g00244 439 SUPERFAMILY DNA-binding pseudobarrel domain 100 207 IPR015300 -
Pte19g00244 439 ProSiteProfiles B3 DNA-binding domain profile. 103 208 IPR003340 GO:0003677
Pte19g00244 439 Gene3D - 96 216 IPR015300 -
Pte19g00244 439 CDD B3_DNA 101 190 IPR003340 GO:0003677
Pte19g00244 439 Pfam B3 DNA binding domain 103 207 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00244 Pte-Chr19 1863015 1865643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00244 93 432 RAV Transcription Factor Family AT2G46870 45.115 2.60e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pte19g00244 B3 1.4e-29 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00244 K09287 - qsa:O6P43_018503 358.221