Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00238 ATGGTGATGCTAAAGAGAACAACCCCTGATTCTCTTCCAACTTCTTGGGAGCATGTTACGATGATTACACATGGGGAAGCAGTTCCAAGACCAAGGTCTACACCTACACCTGCACCTGCAACTGCAACTGCAACTGCAACATCACTCTCAAGAAGAATCTCTTCTTCTTACCTGTCTTCCTTGAAGTACTGTTTGTCTTTGAAATTTATAGTCAACCTCATACCAATAACATTAATCCTCTCTTTATGTGATGTTGCAACTGCTGCCTCTTGTAACCAACTCGACCAAGACGCACTCTTGTCCTTCAATTTACACCCTCCTCTCAACTGGTCGTCTTCTGTTGATTGTTGTCTATGGGAAGGCGTTACATGTGATGAAGTGGGAGCTAGTGGGGATCAGAGGGTCATTCGTCTATGGCTGCCATCAAGAGGTCTCAGTGGATTTCTCTCACCATCTATAGCAAACCTCAGCCATCTGTCTCAATTAAATATATCCCACAATAGATTCTCATGGTTTCTTCCAATCCAATTATTCTCACTTCTCAAACAGCTCCAGATTCTTGATTTGAGCTATAACCGTTTCACTGGAGAGCTACCACAATTTGACATAAATAGCAGTGTCATTGAGGTGGTGGATTTATCAAGCAACCTGTTCCGAGGGATTCTGCCATTGTCATTTATTCATCTTCTATCAGATGCAGCGGCAAGGGGCACTTTGACAAGTTTTAATGTCAGTAATAATAGCCTCACTGGTCAAATCCCTGTCTCTGGCTTTTGCATTAATGGCAGTAGTTCCTCTCTCAGACTCTTAGATTTTTCATACAATCAATTCAATGGTTCGATAACCCCTGGACTAGGAAATTGTTTCAAGCTGGAGGTTTTTAAAGCAGGCTATAACTCTCTATCTGGAAAAATTCCTAGTGATATTTTTGGTGCTGTTTCACTTCAAGAACTTTCTTTACCAGCAAATAAATTATCTGGAACCATTGAAGATGGCATTGCTGGCCTTGCAAATCTTAAAGTCCTAGCGCTTTACTCCAATTTTCTGTATGGACTTATCCCCAACAGTATTGGTAAGCTCTCACAATTGGAGCATATATTTCTTCATATTAATAACCTGACAGGGATTCTACCACCATCTCTAATGAACTGCACTAACCTTGTTACATTGAATTTGAGGGTGAACAACTTTGCGGACGATCTCTCAAAATTCAATTTCTCCATGTTCACTCGGCTAACCACACTTGATCTTGGTAACAACAATTTTAGTGGCAACCTACCAAAAAGCCTCTATGCATGCAGCTCACTGACTGCTTTAAGACTAGCCGATAATCAGCTGCGAGGACAGATCTCATCGGACATACTTGAGCTGCGGTCTCTGTCTTTCCTGTCTATTTCTACCAATAATCTAAGTGACTTTGCTGGGGCCATCAATATTCTTCAGAAACTCAGAAACCTGAGTACCCTTGTGCTCTCCAAGAATTTTTTTGAGGAACCAATCCCAAGCAATGAAAACGCAATCGGACCAGATGGGTTCCAGAAGCTCCAAATTCTTGCTCTAGGAGGCTGCAACTTTACAGGCCAAGTGCCTGCCTGGCTTGTGAAATTGAAGAAGCTTGAGGTCTTGGATCTTTCAGTTAATCAACTCACTGGATCAATTCCTGGTTGGTTTAGTTCTCTGACACAGTTTTTCTATATAGATTTGTCTAGTAACAAGCTTACTGGAGAGTTTCCGATAGATCTCACAAGATTGCCATCACTTACTTCGCAACAGGCAAGTGATAAAATAGAAAGAACAAATCTCGCTTTGCCTGTCTTTGTTGCACCGAATAATGCTACTTTGCAGCAGTACAATCAGCTTTCCAACCTTCCTCCTGCAATATACCTGCGAAACAATAGTCTTGATGGCGTTATACCTGTAGAGGTTGGTCAACTGAAGCTTCTTCATGTGCTTGATCTCAGTCTCAACAACTTTTCTGGCAATATCACTGATCAACTTTCTAACCTGATTAACTTAGAGTGGTTGGACCTGTCCTCTAATAAACTATCTGGGCAAATCCCTTCTTCACTCAAAGGACTTCACTTCTTGTCTTATTTTAATGTGGCATCTAACGATCTTGAAGGGCAAATACCAACTGGAGGCCAATTTGATACATTCTCTAATGCCAGCTTTGAAGGGAACCCCCTTTTGTGTGGAGCACCAGTACAGCGGTCTTGCTTTGAACAGCAAGCTAAAAGAACTGCTCATGAAGGCCAAAACCAAAAAGTAATTGTTGCTATTATTATTTGTTCCTGTTTTGGCGCAGCTTTGATTGTGTCCATATTAACATTGTTGATACTATCAAAGAGGAGGATAATTCCTAGGGGAGAATCTGACAAGAACGATTTGGAAATTAATTCTATCAACTCCAGTGCTGGGGCTGACGCAGAGGTTGATAGGGATGCCAGCCTAGTAGTGATGTTTCCGGACAAAATGAATGGAATCAAAGATCTTACAATAGCTGATATCTTGAAAGCAACCGAAAATTTCAGTCAACAAAACATCATTGGCTGTGGGGGCTTTGGTTTAGTTTATAGAGCAACATTAGTGAATGGGACTAAGTTAGCTATAAAAAGACTTTCTGGAGATCTAGGAATGATGGGAAGGGAATTTGAAGCAGAGGTCGAGGCTCTATCAACAACACAACATGAGAATTTGGTTTCATTGAAAGGATATTGCCTGCATGGTGGCTTTCGGCTACTGATTTATACTTACATGGAGAATGGAAGTCTTGACTACTGGTTGCATGAGAAGACTGATGGGGCATCTCAGCTAGATTGGCCTACTAGATTGAAGATTGCAAAGGGAGCCAGCCATGGGTTGGCTTATATGCACCAAATATGCGAGCCACACATTGTTCATCGTGATATCAAGTCAAGCAACATTCTACTTGATGAAAATTTTGAAGCACATGTTGCTGATTTTGGACTAGCACGCTTAATTCTTCCCTATCACACTCATGTTACCACTGAACTTGTAGGGACCTTGGGATATATTCCGCCTGAGTATGGTCAGGCTTGGGTAGCAACTTTGAGAGGTGACATGTACAGTTTTGGGGTTGTGATGCTTGAGCTGCTCACAGGGAAGAGACCTGTTGAAGTAACGAAGCCAAAGATGTCTAGAGAGTTAGTTGGATGGGTGCAACAGATGAGAAATGAAGGGAAACAATATCAAATCTTTGACCCCCTCTTGAGAGGAAAGGGCTATGAAGAACAAATGTTGCAGGTGTTAGAAGCAGCATGCATGTGTGTCAGCCAGAACCCTGTCAAGAGACCAACCATTCAGGACGTCGTCAATATGCTGAAGAACGTTGGATCCGTACACCAAAACCAAAATATGGAGTAG 3384 0.4187 MVMLKRTTPDSLPTSWEHVTMITHGEAVPRPRSTPTPAPATATATATSLSRRISSSYLSSLKYCLSLKFIVNLIPITLILSLCDVATAASCNQLDQDALLSFNLHPPLNWSSSVDCCLWEGVTCDEVGASGDQRVIRLWLPSRGLSGFLSPSIANLSHLSQLNISHNRFSWFLPIQLFSLLKQLQILDLSYNRFTGELPQFDINSSVIEVVDLSSNLFRGILPLSFIHLLSDAAARGTLTSFNVSNNSLTGQIPVSGFCINGSSSSLRLLDFSYNQFNGSITPGLGNCFKLEVFKAGYNSLSGKIPSDIFGAVSLQELSLPANKLSGTIEDGIAGLANLKVLALYSNFLYGLIPNSIGKLSQLEHIFLHINNLTGILPPSLMNCTNLVTLNLRVNNFADDLSKFNFSMFTRLTTLDLGNNNFSGNLPKSLYACSSLTALRLADNQLRGQISSDILELRSLSFLSISTNNLSDFAGAINILQKLRNLSTLVLSKNFFEEPIPSNENAIGPDGFQKLQILALGGCNFTGQVPAWLVKLKKLEVLDLSVNQLTGSIPGWFSSLTQFFYIDLSSNKLTGEFPIDLTRLPSLTSQQASDKIERTNLALPVFVAPNNATLQQYNQLSNLPPAIYLRNNSLDGVIPVEVGQLKLLHVLDLSLNNFSGNITDQLSNLINLEWLDLSSNKLSGQIPSSLKGLHFLSYFNVASNDLEGQIPTGGQFDTFSNASFEGNPLLCGAPVQRSCFEQQAKRTAHEGQNQKVIVAIIICSCFGAALIVSILTLLILSKRRIIPRGESDKNDLEINSINSSAGADAEVDRDASLVVMFPDKMNGIKDLTIADILKATENFSQQNIIGCGGFGLVYRATLVNGTKLAIKRLSGDLGMMGREFEAEVEALSTTQHENLVSLKGYCLHGGFRLLIYTYMENGSLDYWLHEKTDGASQLDWPTRLKIAKGASHGLAYMHQICEPHIVHRDIKSSNILLDENFEAHVADFGLARLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDMYSFGVVMLELLTGKRPVEVTKPKMSRELVGWVQQMRNEGKQYQIFDPLLRGKGYEEQMLQVLEAACMCVSQNPVKRPTIQDVVNMLKNVGSVHQNQNME* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00238 1127 Gene3D Ribonuclease Inhibitor 94 205 IPR032675 -
Pte19g00238 1127 SUPERFAMILY Protein kinase-like (PK-like) 828 1114 IPR011009 -
Pte19g00238 1127 Pfam Leucine rich repeat 514 573 IPR001611 GO:0005515
Pte19g00238 1127 Gene3D Phosphorylase Kinase; domain 1 806 918 - -
Pte19g00238 1127 Pfam Protein kinase domain 844 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00238 1127 SMART serkin_6 843 1114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00238 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 965 977 IPR008271 GO:0004672|GO:0006468
Pte19g00238 1127 PRINTS Leucine-rich repeat signature 539 552 - -
Pte19g00238 1127 PRINTS Leucine-rich repeat signature 669 682 - -
Pte19g00238 1127 ProSitePatterns Protein kinases ATP-binding region signature. 849 871 IPR017441 GO:0005524
Pte19g00238 1127 Gene3D Ribonuclease Inhibitor 296 403 IPR032675 -
Pte19g00238 1127 SUPERFAMILY L domain-like 261 593 - -
Pte19g00238 1127 Gene3D Ribonuclease Inhibitor 206 289 IPR032675 -
Pte19g00238 1127 FunFam Leucine-rich repeat receptor-like protein kinase 919 1125 - -
Pte19g00238 1127 Pfam Leucine Rich Repeat 671 693 IPR001611 GO:0005515
Pte19g00238 1127 Pfam Leucine rich repeat N-terminal domain 101 125 IPR013210 -
Pte19g00238 1127 PANTHER LEUCINE RICH REPEAT KINASE 2 137 283 - -
Pte19g00238 1127 FunFam Tyrosine-sulfated glycopeptide receptor 1 406 744 - -
Pte19g00238 1127 ProSiteProfiles Protein kinase domain profile. 843 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00238 1127 SMART LRR_typ_2 336 359 IPR003591 -
Pte19g00238 1127 SMART LRR_typ_2 360 383 IPR003591 -
Pte19g00238 1127 SMART LRR_typ_2 156 180 IPR003591 -
Pte19g00238 1127 SMART LRR_typ_2 536 559 IPR003591 -
Pte19g00238 1127 SMART LRR_typ_2 669 692 IPR003591 -
Pte19g00238 1127 SMART LRR_typ_2 457 480 IPR003591 -
Pte19g00238 1127 SMART LRR_typ_2 181 205 IPR003591 -
Pte19g00238 1127 SMART LRR_typ_2 409 433 IPR003591 -
Pte19g00238 1127 Gene3D Ribonuclease Inhibitor 404 748 IPR032675 -
Pte19g00238 1127 SUPERFAMILY L domain-like 616 734 - -
Pte19g00238 1127 MobiDBLite consensus disorder prediction 26 45 - -
Pte19g00238 1127 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 306 401 - -
Pte19g00238 1127 Gene3D Transferase(Phosphotransferase) domain 1 919 1127 - -
Pte19g00238 1127 FunFam Putative LRR receptor-like serine/threonine-protein kinase 803 918 - -
Pte19g00238 1127 SUPERFAMILY L domain-like 128 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00238 Pte-Chr19 1808973 1812578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00238 73 772 Miscellaneous Gene Families AT1G17240 51.120 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pte19g00238 Pkinase 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00238 - - qsa:O6P43_018492 1455.27