Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00230 ATGACTGACAGTGACATAGCCAGTTACGAGGCCAAGTTGGCAACCAATGGCCGAAAGCTCGGTGAGGTGGAAAATCAAAGAGATGAGGTTCAGTGGCCGGAATGGTTGTCAGCCGGAGATAGGCGGATTTTACAATCATCAACGGTGAGGCCTGATGTGGTGGTGGCAGCAGATGGCAGTGGCAACTTTAGAACTGTGTCTGCAGCAGTGGCTGCTGCCCCAGAGAAGAGTAGCAGGAGATTTATCATTAGAATAAAAGCAGGCGTATATAGAGAAAACGTGGAGGTACCGAAGAAAAAGACTAATATTATGTTCCTGGGAGATGGGAGAACGCACACCATCATCACAGGGAGCAGAAATGTTGTTGACGGCAGCACAACATTCCATTCTGCTACACTGGGCCTTCAAAGCACCAAGCAGTTGCACTACGGGTTGGTGCAGATTTCTCAGCCTTTCATCGCTGCGACGTTGTGGCATACCAAGACACTCTACGTTCACAGCAATCGCCAATTCTTTATGAGCTGTTTCATAGCTGGGACCGTCGATTTTATCTTTGGCAACTCTGCTGTTGTGTTCCAAGATTGTGACATTCATGCAAGACTTCCAGGTTCAGGCCAAAAAAACATGGTGACTGCACAAGGCCGTGTGGACCCGAATCAAAACACCGGCATTATGATTCAGAAGTCTAGGATTGCGGCCACTGCAGAGTTGGAAGCTGACAAAGGCAGCTTCAAAACATTTCTTGGTAGGCCATGGAAGGAGTACTCAAGAACTGTCATCATGCAGACATCAATAAGTGATGTAATTGACCCTGCAGGGTGGCATGAATGGAATGGCAATTTTGCATTGAACACATTGTTCTATGGAGAGTATCAGAACACTGGAGTAGGGGCAAGCACCTCAAGGAGGGTTAACTGGAGAGGCTTCAAGGTGATCACCAATGCTACTGAAGCTCAGGCTTATACTCCTGGAAGGTTCATTGCTGGTGCTAGCTGGTTAAGTTCTACTGGTTTTCCATTCTCACTTGGGATGTAA 1035 0.4744 MTDSDIASYEAKLATNGRKLGEVENQRDEVQWPEWLSAGDRRILQSSTVRPDVVVAADGSGNFRTVSAAVAAAPEKSSRRFIIRIKAGVYRENVEVPKKKTNIMFLGDGRTHTIITGSRNVVDGSTTFHSATLGLQSTKQLHYGLVQISQPFIAATLWHTKTLYVHSNRQFFMSCFIAGTVDFIFGNSAVVFQDCDIHARLPGSGQKNMVTAQGRVDPNQNTGIMIQKSRIAATAELEADKGSFKTFLGRPWKEYSRTVIMQTSISDVIDPAGWHEWNGNFALNTLFYGEYQNTGVGASTSRRVNWRGFKVITNATEAQAYTPGRFIAGASWLSSTGFPFSLGM* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00230 344 ProSitePatterns Pectinesterase signature 1. 77 96 IPR018040 -
Pte19g00230 344 SUPERFAMILY Pectin lyase-like 47 343 IPR011050 -
Pte19g00230 344 PANTHER PECTINESTERASE 160 334 - -
Pte19g00230 344 ProSitePatterns Pectinesterase signature 2. 177 186 IPR033131 -
Pte19g00230 344 Gene3D - 154 344 IPR012334 -
Pte19g00230 344 Gene3D - 45 147 IPR012334 -
Pte19g00230 344 Pfam Pectinesterase 52 139 IPR000070 GO:0030599|GO:0042545
Pte19g00230 344 Pfam Pectinesterase 160 329 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00230 Pte-Chr19 1754453 1756707 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00230 1 345 Carbohydrate Esterase AT3G14310 64.116 1.60e-162 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00230 K01051 - csv:101212388 491.5