Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00229 ATGGATTCTGTGAACTCCTTCACGGGCTATGGTAAAGTAGATGAGCCTGAGGAACAAGCATTCAAGAAAAAGACACGTAAGCACATCATAAGCATTCTCCTCTCGACCGTGCTACTCGCTGCAGTGATTACTACTGCCGCTGTAGGAACCGTCATACACAGGCGCAACACCTCATCTGACTCGGCTACCTCGGCTCCACCCACTGAGTTAACACCCTCCGCGTCACTCAAATCGGTGTGTCAGGTGACTCAGTATCCAAACTCTTGCTTCTCTAGTATCTCCTCACTTCCAAACTCCAACACCACCGACCCACAACTCCTCTTCAAGCTATCTCTGCATGTCGCCATTGATGAGCTTTCCAAGCTTTCACAGTACCCATCTAATTTTTCAGCGATAACCAACGATGGTCGAATGAAGTCTGCATGGTCTGTGTGTCAGACTGTATTGGACGACGCTATGGGTAAACTCAATGAATCCATTTCAGCTATGGAAGTGAGTAAAGGTGAAAATTGGAAGGTATTGTCAGTCTCTACGATCAAAGACATTGAGACTTGGCTTAGTACTACGCTTACTGACATACAAACATGCTTGGATGCTTTTGAAGAATTGAACTCTTCTGCTTCAAAAGATGTTCTTTTTGGTCTGAAGACTGCTATGGAGAACTCAACTGAGTTTGCAAGCAATAGTTTGGCCATTGTGAGTAAAGTTTTGAGTGTGCTTACTGACTTCAATATTCCTATCCATCGAAGATTACTCGGGTCAGGAAGATCCGACTTGAGTTTCCCCGAATGGGTCGGCCCGGTTGAGAAAAGGTTGCTGCATGAGAATAACACTGCAGAAGATGTGCATTTCACAGTGTCCAAGGATGGCAGCGGTGACTTTCAAAGTATCAAAGAGGCTGTGGCACAGGTACCTAAGAAGAGTGAAACAAGGTATGTGATCTATGTGAAAGAAGGCAGGTACGAGGAGAACGTTGTGTTGGATAAGGACAAATGGAATGTGATGATAATTGGTGATGGCAAGGACAAGACCGTTGTCTCAGGAAGCTTGAATTTTATTGATGGCACACCAACATTTCATACTGCTACGTTTGCTGTTGTAGGCAAAGGATTCATTGCAAAAGGTATTGGTTTCTTCAACACTGCCGGTGCTGCTAAGCACCAGGCTGTAGCATTTCGCTCAGGCTCGGATCGCTCTGTGTATTACAGATGCGCATTTGATGGTTTCCAAGACACCCTCTATGTTCACTCTAACCGTCAGTTCTACCGTGAATGTGACATTACTGGTACTGTAGATTTCATCTTTGGCAATGCAGCTGTTGTTTTCCAAAGCTGTAACATAATGCCTAGGCAACCTCTACCTAACCAATTCAACGCCATTACTGCACAAGGGAAGAAAGACCCTAATCAGAACACTGCCATTTCAATCCAGAAGTGCTCATTCTCTGCATTTGATAACCTCACAGCTCCTACATACCTTGGCAGGCCTTGGCAACAGTATGCCACTACTGTTGTCATGCAATCTGATATTGGTTCATTCTTGCACCCATTGGGTTGGACACCATGGGTTCAGAATCTTGACCCACCTGGCACGATATTCTACGCAGAGTACCAGAATTCTGGACCAGGGTCGAGTGTGGTGGATCGGGTTAAATGGGTTGGTTATACAGCTGCTCTAACTGAGGATGAGGCTGCAATGTTTACTGTGGATTCATTGATCCAAGGTCATGACTGGCTGGGAGGAACGGAAGTGACTTATGATAATTCTTTATGA 1773 0.4523 MDSVNSFTGYGKVDEPEEQAFKKKTRKHIISILLSTVLLAAVITTAAVGTVIHRRNTSSDSATSAPPTELTPSASLKSVCQVTQYPNSCFSSISSLPNSNTTDPQLLFKLSLHVAIDELSKLSQYPSNFSAITNDGRMKSAWSVCQTVLDDAMGKLNESISAMEVSKGENWKVLSVSTIKDIETWLSTTLTDIQTCLDAFEELNSSASKDVLFGLKTAMENSTEFASNSLAIVSKVLSVLTDFNIPIHRRLLGSGRSDLSFPEWVGPVEKRLLHENNTAEDVHFTVSKDGSGDFQSIKEAVAQVPKKSETRYVIYVKEGRYEENVVLDKDKWNVMIIGDGKDKTVVSGSLNFIDGTPTFHTATFAVVGKGFIAKGIGFFNTAGAAKHQAVAFRSGSDRSVYYRCAFDGFQDTLYVHSNRQFYRECDITGTVDFIFGNAAVVFQSCNIMPRQPLPNQFNAITAQGKKDPNQNTAISIQKCSFSAFDNLTAPTYLGRPWQQYATTVVMQSDIGSFLHPLGWTPWVQNLDPPGTIFYAEYQNSGPGSSVVDRVKWVGYTAALTEDEAAMFTVDSLIQGHDWLGGTEVTYDNSL* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00229 590 PANTHER PECTINESTERASE 32 580 - -
Pte19g00229 590 SMART PMEI_2 71 232 IPR006501 GO:0004857
Pte19g00229 590 Pfam Pectinesterase 284 575 IPR000070 GO:0030599|GO:0042545
Pte19g00229 590 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 237 IPR035513 -
Pte19g00229 590 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 236 IPR035513 -
Pte19g00229 590 SUPERFAMILY Pectin lyase-like 281 586 IPR011050 -
Pte19g00229 590 NCBIfam pectinesterase inhibitor domain 66 235 IPR006501 GO:0004857
Pte19g00229 590 CDD PMEI-like_3 78 235 - -
Pte19g00229 590 ProSitePatterns Pectinesterase signature 2. 427 436 IPR033131 -
Pte19g00229 590 Gene3D - 279 590 IPR012334 -
Pte19g00229 590 FunFam Pectinesterase 72 237 - -
Pte19g00229 590 FunFam Pectinesterase 277 590 - -
Pte19g00229 590 Pfam Plant invertase/pectin methylesterase inhibitor 76 232 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00229 Pte-Chr19 1746572 1750554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00229 1 584 Carbohydrate Esterase AT1G53840 58.206 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00229 - - qsa:O6P43_027479 832.017