Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00205 ATGGATGAAGACGATGAGATCCAATCGCCGCCGGAGAGCGAGTCACCGCTGAGATCTAACGGGAGGATAACGGTTACTGTGGCAGCTTCGGGACAGGTACCGTCGTCGACTTCACAACCGACGCCGTCAAACGCGTTGGCGTTGGCGTTACCGAACCAACAACAGCAACCGCGGAGTAACGGTGGTGGGAGAGAGGATTGTTGGAGCGAGGGAGCTACGTCAGTGTTGATCGATGCTTGGGGGGAGAGGTACTTGGAGTTGAGTAGAGGGAATCTGAAGCAGAAGAATTGGAAGGAAGTAGCTGAAATTGTGAGTAGCAGAGAGGATTATACGAAAACACCGAAGACAGATATTCAGTGTAAGAATCGGATTGATACAGTGAAAAAGAAGTTCAAGTCGGAGAAAGCAAAGGTTGCAGCTGGTAGTGGACCTAGCAAATGGCCGTTCTTTGAGAAATTGGATAATTTGATTGGTTCATCTGCAAAGATTGTTGCTTCAGTAGGGAATCCAACGATGAGTAACAATTTCCAGACAACCCAGAAAGTCCCTTTGGGAATTCCAGTTGGGGTTAAGCCTGTAAATCAATATCAACAAAAACAGCAGCAGCAATTGTTGAAGAATCAGAAGGTACAAACTCGAAAGCGAGTTCCGGTTGATTCAGATTCATCAGATGGAGTACCCTCACCAATTTCCACCGACAGTTTCCCGCCGGAGACTTATGACAGGAAGAGGCCAAGGTTGATGGTTCAAAGGGGAGAGATGAATTCAAATACTGCTGTTGGCGTTGGTGATGGGGTTGCCATTGGTGGCAGGGAAAAGGAAGGAACAAACGATAAAGGGAATGCAGTGAGGGAATTGGCAGAAGCAATTCTGAAGTTTGGTGAAGCTTATGAACAAGCTGAGACCTCAAAGTTGCAGCAAGTGGTGGAGATGGAGAAGCAGAGGATGAAGTTTGCTAAGGAGGTAGAGTTGCAAAGAATGCAGTTTTTCATGAAAACCCAGTTGGAGATTTCACAGTTGAAACAAAAGGGCAAGAGAAGTGGAAATGCTAGCTGCAAAAATCACCATCTCAGCAATAACCACAGTGATAGTAGTCATAAGGAGTTTTAG 1110 0.4631 MDEDDEIQSPPESESPLRSNGRITVTVAASGQVPSSTSQPTPSNALALALPNQQQQPRSNGGGREDCWSEGATSVLIDAWGERYLELSRGNLKQKNWKEVAEIVSSREDYTKTPKTDIQCKNRIDTVKKKFKSEKAKVAAGSGPSKWPFFEKLDNLIGSSAKIVASVGNPTMSNNFQTTQKVPLGIPVGVKPVNQYQQKQQQQLLKNQKVQTRKRVPVDSDSSDGVPSPISTDSFPPETYDRKRPRLMVQRGEMNSNTAVGVGDGVAIGGREKEGTNDKGNAVRELAEAILKFGEAYEQAETSKLQQVVEMEKQRMKFAKEVELQRMQFFMKTQLEISQLKQKGKRSGNASCKNHHLSNNHSDSSHKEF* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00205 369 MobiDBLite consensus disorder prediction 1 68 - -
Pte19g00205 369 Pfam Myb/SANT-like DNA-binding domain 65 156 IPR044822 -
Pte19g00205 369 FunFam trihelix transcription factor ASIL2 68 133 - -
Pte19g00205 369 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 43 344 IPR044823 -
Pte19g00205 369 MobiDBLite consensus disorder prediction 12 62 - -
Pte19g00205 369 MobiDBLite consensus disorder prediction 258 277 - -
Pte19g00205 369 Gene3D - 68 133 - -
Pte19g00205 369 MobiDBLite consensus disorder prediction 338 358 - -
Pte19g00205 369 MobiDBLite consensus disorder prediction 203 240 - -
Pte19g00205 369 MobiDBLite consensus disorder prediction 338 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00205 Pte-Chr19 1587064 1588762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00205 1 356 Trihelix Transcription Factor Family AT3G14180 45.536 1.07e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte19g00205 Myb_DNA-bind_4 6.3e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00205 - - qsa:O6P43_018442 426.402