Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00195 ATGGCCAAATCTCTAGACATGGGCAACAGCGGAAAGTCCATTAAAGCACATGCTGAGAAACCGACTTTCACTCAGACCTGCAACCTCCTCAGCCAGTTTATGAAGGAGAAGCGTTTGGCTATGGATTCCAGCAAAGGGCTTCCAGTAAAATTGGAACATAAAGCAAAGACTGTGAACCTGTTGACAAGTATGGAAAACTCAGATGATGCTTCTGTAGCGATTGCTGCAGTTATGAAAAGTCTACCACAGTTTCTTCAGAACTCGACAAACAGCAATCAATCTGATTCCAGCAGGGGGAAGGATCAGCTGACAATATTTTACTCTGGAAAGGTCTTAGTTTTTAATAACTTTGCAGCTGAAAATGCGACTGAGGTCATGGAAATGGCAACCCAGCTGAGTTCTAATACTTCCACCATGGAAAAAGCTCAAACCAGGACATCTCCAGTTCCTTCTGAAATTATAAAAATGGCTGTGCCTGCAGTCAACAGCACTGATCAACAATGCCCTCCTGCAGAGTCTCAAGCCGGTGGTTCCAATTTGAAGATTGCAAGAAGAGCTTCCCTTCATAAATTCTTTGAGAAAAGAAAAGAAAGGGTCACAGCAAGAGGGCCTTATCCATTGAATAACCCTATGACTGCTTCTGCTTCCAAGCCAACAGATGAATCCAGTTCAGGAGCTTCAGACGATCACCATGATCATGGGCAATCTTCTAAAGAGCTTGACCTCACGTTATAG 735 0.4367 MAKSLDMGNSGKSIKAHAEKPTFTQTCNLLSQFMKEKRLAMDSSKGLPVKLEHKAKTVNLLTSMENSDDASVAIAAVMKSLPQFLQNSTNSNQSDSSRGKDQLTIFYSGKVLVFNNFAAENATEVMEMATQLSSNTSTMEKAQTRTSPVPSEIIKMAVPAVNSTDQQCPPAESQAGGSNLKIARRASLHKFFEKRKERVTARGPYPLNNPMTASASKPTDESSSGASDDHHDHGQSSKELDLTL* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00195 244 Pfam tify domain 101 129 IPR010399 -
Pte19g00195 244 SMART tify_2 96 131 IPR010399 -
Pte19g00195 244 Pfam Jas motif 182 205 IPR018467 -
Pte19g00195 244 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 19 218 IPR040390 -
Pte19g00195 244 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
Pte19g00195 244 MobiDBLite consensus disorder prediction 207 222 - -
Pte19g00195 244 MobiDBLite consensus disorder prediction 223 244 - -
Pte19g00195 244 MobiDBLite consensus disorder prediction 197 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00195 Pte-Chr19 1515088 1517327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00195 1 215 Tify Gene Family AT1G19180 32.510 1.67e-25 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pte19g00195 tify 1.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00195 K13464 - qsa:O6P43_018427 183.341