Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00193 ATGGATGATTCTCCTGGAAATGTTGAGTTGGCTTTTGACAAAGCTGAGAAGGTAATACTAAGGTGGGACTCCACTGTTTCTGAAGAAGCCAGAGAAAAAATGATCTTTGATGGTGATCGTCAAGAGGTTGATCTCTACTTACAAGCTGTGGATGAAATACGGAAGTCTGTGTCTTCAACTTGTATCTCTGATGATGGGCAAAACAAAGTCAACACAGCTATTCAGATCGCCATGGCTCGCCTTGAAGATGAGTTTCGCAACATACTGATCAAACATACGAATCCTATTGAAGCTGATTCCCTTATCGATCCAACCTCTTCTCGTCACTCTAGCTCTTCGCATGTTGGTGGAGGAGCTGAGTTTGATGATGAGACTAATGTTGAAGATGAAGAAGATTGCGGTACTCCTTGTTCTTTGATCAAAGGAGAGGAACTACTTTTTCATAGTAGTAGTGCGGTGTCAAGTGGTACTAGTGGAAGCTATCAGTCCACCAGGAGTGTCCGTGAGATCGATCTGATACCTTGTGAAGCCATTGATGACCTTAGGAGCATAGTTGAGAGGATGATCTCATCTAGCTATTTGAGGGAGTGCATCCAAGTTTATGGCAGTGTGAGAAAATCAGCAGTAGATGCAAGCTTTAGGAGGCTTGGAGTTGAGAAATTGAGCATAGGTGACATTCAGAGGTTGGAGTGGGACCAACTAGAAGTTAAGATTAGAAGGTGGATAAGGGCTGCTAAGGTTTGTGTTAGGATATTGTTTGCAAGTGAGAAGAAGCTCTGTGAACAAATCTTTGATGGGGTTGGGACTGCTATTGATGATGCTTGCTTTATGGAAACAGTCAAAGGTCCGGCTATTCAGCTGTTCAATTTTGCTGAGGCTATTAGTATAAGCAGAAGATCTCCTGAGAAGTTGTTTAAGATTTTGGACCTTCATGATGCTTTAATGGATTTGATGCCTGATATAGACGTTGTATTTGTATCGAAATCGTCAGAATCAATTCGAATTCAAGCAGCTGAGATCCTCTCTAGGCTAACAGAAGCAGCAAGAGGAATATTATCAGAGTTTGAGAGTGCTGTGCTTCGTGAGCCGTCAAAGGTTCCAGTGCCAGGTGGCACAATTCACCCTTTGACAAGGTATGTGATGAATTATATAAGTTTGATATCTGATTACAAGCAAACCATGAATGAGCTTATTGTGTCAAAACCATCCACGGGGTCAAGATATTCGGGCGATCCATCGACACCAGATATGGATTTCAGTGAACTGGAGGGCAATGCCCCATTGGCAATTCATTTGGTTTGGATTATTGTGATTTTGCAATTTAATCTAGATGGCAAGTCAAAGCGCTATATCGATGCATCTTTGTCTCATTTGTTTATGATGAATAATGTTCACTACATTGTTCAAAAGATAAAAGGGTCTCCTGAACTCCGGCAGATGATTGGAGATGATTATTTGAAGAAGCTTACTCGGAAATTCCGGCAGGCTGCAACTAATTATCAGAGAACAACTTGGGTTAGGGTCTTGTATTGTTTGAGAGATGAGGGATTGCATATGAGTGGGAGTTTTTCTTCTGGAGTCTCAAAGAGTGCTTTGAGAGAAAGGTTTAAGGCCTTCAATGCGATGTTTGAAGAGGTGTACAGGACTCAAGCAATTTGGTTGATTCCTGACTCTCAGTTAAGGGAAGAGCTTCGAATATCCATATCTGAGAAAGTGATACCAGCTTATAGGTCATTTCTTGGCCGGTTCAGGAGTCATATAGAGAGTGGAAAGCATCCAGAGAACTACATTAAGTACTCAGTTGAAGATTTGGAGAATGCTGTCTTGGACTTTTTTGAAGGTTACCCTGTTTCTCAACATTTGAGGAAAAGATCACAGTGA 1881 0.4157 MDDSPGNVELAFDKAEKVILRWDSTVSEEAREKMIFDGDRQEVDLYLQAVDEIRKSVSSTCISDDGQNKVNTAIQIAMARLEDEFRNILIKHTNPIEADSLIDPTSSRHSSSSHVGGGAEFDDETNVEDEEDCGTPCSLIKGEELLFHSSSAVSSGTSGSYQSTRSVREIDLIPCEAIDDLRSIVERMISSSYLRECIQVYGSVRKSAVDASFRRLGVEKLSIGDIQRLEWDQLEVKIRRWIRAAKVCVRILFASEKKLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLMPDIDVVFVSKSSESIRIQAAEILSRLTEAARGILSEFESAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYKQTMNELIVSKPSTGSRYSGDPSTPDMDFSELEGNAPLAIHLVWIIVILQFNLDGKSKRYIDASLSHLFMMNNVHYIVQKIKGSPELRQMIGDDYLKKLTRKFRQAATNYQRTTWVRVLYCLRDEGLHMSGSFSSGVSKSALRERFKAFNAMFEEVYRTQAIWLIPDSQLREELRISISEKVIPAYRSFLGRFRSHIESGKHPENYIKYSVEDLENAVLDFFEGYPVSQHLRKRSQ* 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00193 626 Gene3D Exocyst complex component Exo70 140 622 - -
Pte19g00193 626 Gene3D Exocyst complex component Exo70 18 121 - -
Pte19g00193 626 Pfam Exo70 exocyst complex subunit 240 608 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte19g00193 626 MobiDBLite consensus disorder prediction 100 128 - -
Pte19g00193 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 7 614 IPR004140 GO:0000145|GO:0006887
Pte19g00193 626 SUPERFAMILY Cullin repeat-like 40 613 IPR016159 -
Pte19g00193 626 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00193 Pte-Chr19 1496754 1500998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00193 11 627 EXO70 exocyst subunit family AT1G72470 69.775 0.0 842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00193 K07195 - qsa:O6P43_018425 1001.89