Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00183 ATGTCTTTGATGAAACTGTTACAGAAGTACATCACAGCCAATTCCTTGAAATCAAAGAAGAGAAATCTGTGTTGGGAGCCAAAACCAGAATGTTCCAGAAAGACATCATGTAGGATGTCTCTGTCTGACTTGAGTGATTCATCATCAACCATGTCTGTCATGAGTGACTTGTCCAATTCCGCACTGGGATCAAATCTTCAAGCATTTACTCTAGGAGAACTCAGAGACATCACTCAGAACTTCTCAGCAAGCAATCTCCTCGGTGAAGGTGGGTTTGGAAGAGTGTATAAAGGATTCATTGATGACAGCTTTAGGCCTGGTTTTGAAGCTCAACTTGTAGCTGTCAAAATGCTGGACATGGATGGCAATCAAGGACACAGAGAGTGGCTTGCTGAAATAATATTTCTTGGTCAAGTGAAGCATCCCCATCTTGTAAAATTGATCGGATATTGCTGTGAAGATGAGCACAGGTTGCTTGTCTATGAGTATATGGACCAAGGCAACCTGGATACAATACTCTTTGACAATTATACAGCAACCTTGCCTTGGTTAACAAGACTGAAAATTGCAGTTGGAGCTGCCAAAGGGATTGCTTTGCTTCATGAAGAAGAAAAGCCAATCATATATAGAGACTTGAAAGCTTCAAACATATTATTGGACAAAGATTACAATGCGAAGGTCTCTGATTTTGGGCTTGCTACTGATAGTCTTGATGGAGAACAAACACATGTAAATACAAGAGTGATGGGTACCTATGGATATGCTGCTCCTGAATATCTCAAGACAGGTCATTTAACGACTAGCAGTGATGTATATAGCTTTGGGGTAGTCCTTCTGGAGTTGCTTACAGGAAGGCGTTCCATTGACAAGTGTAGGCCTACAAGAGAGCAGAATTTGGTAGAGTGGGCAAGACCTATGTTGAAGGACCCTTACAAGCTTGATAGGATTATGGACTCAAGACTTGAAGGTCAGTACTCTAGACAAGGGGTTAAAAAGACTGCTCTATTAGCTTATCAATGTCTAAGCCATCATCCAAAATCAAGGCCTACCATGAGAACTGTGGTGAAGACCTTAGAACCTCTCGTGGACTTAAATGACATCCCAATTGGCTGCTTTGTCTTTGTCGTCTCAACTGAGGCAACAGAAAGGAGTTCAGTTATCATGGGCAGTGAGAAAAACGTCAATCATCGAATGAAGAAGACAAATGCAGTGACAAAGACAAGGGGCTTCCTCGTAGGCGTCGAAAAAGTCAGAGGTGGAAAACATCAGATTAATCCACTGAATTGTCAACTAAGACACTGCTCTGTATAG 1311 0.418 MSLMKLLQKYITANSLKSKKRNLCWEPKPECSRKTSCRMSLSDLSDSSSTMSVMSDLSNSALGSNLQAFTLGELRDITQNFSASNLLGEGGFGRVYKGFIDDSFRPGFEAQLVAVKMLDMDGNQGHREWLAEIIFLGQVKHPHLVKLIGYCCEDEHRLLVYEYMDQGNLDTILFDNYTATLPWLTRLKIAVGAAKGIALLHEEEKPIIYRDLKASNILLDKDYNAKVSDFGLATDSLDGEQTHVNTRVMGTYGYAAPEYLKTGHLTTSSDVYSFGVVLLELLTGRRSIDKCRPTREQNLVEWARPMLKDPYKLDRIMDSRLEGQYSRQGVKKTALLAYQCLSHHPKSRPTMRTVVKTLEPLVDLNDIPIGCFVFVVSTEATERSSVIMGSEKNVNHRMKKTNAVTKTRGFLVGVEKVRGGKHQINPLNCQLRHCSV* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00183 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pte19g00183 436 ProSiteProfiles Protein kinase domain profile. 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00183 436 FunFam Serine/threonine-protein kinase BIK1 47 163 - -
Pte19g00183 436 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 164 367 - -
Pte19g00183 436 CDD STKc_IRAK 87 361 - -
Pte19g00183 436 SUPERFAMILY Protein kinase-like (PK-like) 55 358 IPR011009 -
Pte19g00183 436 SMART serkin_6 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte19g00183 436 Pfam Protein tyrosine and serine/threonine kinase 84 358 IPR001245 GO:0004672|GO:0006468
Pte19g00183 436 Gene3D Transferase(Phosphotransferase) domain 1 164 367 - -
Pte19g00183 436 PANTHER OS01G0588500 PROTEIN-RELATED 47 361 - -
Pte19g00183 436 ProSitePatterns Protein kinases ATP-binding region signature. 87 116 IPR017441 GO:0005524
Pte19g00183 436 Gene3D Phosphorylase Kinase; domain 1 41 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00183 Pte-Chr19 1428821 1431788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00183 67 358 Glycoside Hydrolase AT3G07070 50.847 5.64e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte19g00183 PK_Tyr_Ser-Thr 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00183 - - qsa:O6P43_027541 543.117