Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00178 ATGATGTGCAGTGATGGAAATGCAAGCAACACAAGTGCAAGTACAAGAAATAGGTCTTCTTTCACAGCTGCTCAGTGGCAAGAGCTTGAACACCAAGCTCTCATCTTCAAGTACATGATCTCAGGCATGCCTATCCCACCTGAGCTCATCTACTCAGTCAAAAGAAGCTTAAACTCTTCCACATCTTCAAGGTTCTTTCCAACCCATCATCCCGTGGGATGGGGATGTTTTGATATGAGTTTTGGCAGAAAAGTAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAAAAATGGAGATGCTCGAAGGAGGCCTATCCAGATTCCACGTACTGTGAAAAACACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTGCTGCTCCTACACCTACTGCTACAGCAAACAACACAACAACCAACAACGCCATCACCTCACCATCAATCTCTTCAATGAACAGAAACATTTCCCTAAGCAACAATCCTGGCACATCCCATCTCCTTTCTCTTTTTCTCCACTGTCTTCCTACCCTTATCCATGTCTGA 558 0.4552 MMCSDGNASNTSASTRNRSSFTAAQWQELEHQALIFKYMISGMPIPPELIYSVKRSLNSSTSSRFFPTHHPVGWGCFDMSFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSTYCEKHMHRGRNRSRKPVEVAAPTPTATANNTTTNNAITSPSISSMNRNISLSNNPGTSHLLSLFLHCLPTLIHV* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00178 185 PANTHER GROWTH-REGULATING FACTOR 5 12 158 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pte19g00178 185 Pfam QLQ 20 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte19g00178 185 MobiDBLite consensus disorder prediction 116 152 - -
Pte19g00178 185 SMART QLQ_2 19 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte19g00178 185 Pfam WRC 87 129 IPR014977 -
Pte19g00178 185 ProSiteProfiles QLQ domain profile. 20 55 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pte19g00178 185 MobiDBLite consensus disorder prediction 134 152 - -
Pte19g00178 185 ProSiteProfiles WRC domain profile. 86 130 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00178 Pte-Chr19 1399654 1400361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00178 9 149 GRF Transcription Factor Family AT3G13960 61.538 1.68e-58 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pte19g00178 WRC 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00178 - - zju:107403359 236.498