Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte19g00170 ATGTTGACTTGTATAGCTTGTTCGAAGCAACTCGATAGTGGATCTCTCCAACGACAAGAAGATGATACTGTTGGAACACCAAGTACCAAGCATGCTGTAAAGGCTCTCAGTGCTCAGATCAAAGACATAGCACTGAAAGCTTCAAGTGCATATAAGAATTGCAAGCCTTGTTCAGGTTCATCAAATGACAATAAAAATAGAAACTTTTCCGAGTCTGGTACAGCATCACAGTCTGCAAGGTTCCACTGTGCTTATCGTAGAACTGGTATCTCCAACTCTACACCTAGGCAGTGGGGAAAAGAAATGGAAGCAAGATTGAAAGCTCTTTCAAGTGGAGAGGGAACACCAGCATCAGTGAGTGGACGTAGTGAGTCAATTGTTTTAATGGAGGAGGATGAACCAAAGCAATGGGTAGCACAAGTAGAGCCTGGTGTGTTGATCACATTTGTTTCATTGCCTCAAGGAGGAAATGATATGAAGCGCATACGGTTCAGTCGCGACATGTTCAATAAATGGCAAGCTCAAAGGTGGTGGGAGGAAAATTATGAAAAGATCACGGAACTTTACAATGTTCAAAGGTTAAATCAACAAGGAGTGCCCCCTCAAACTCCATCTAGATCTGAAGATGAGAGTTCAAAGATTGAATCTGTCAGAGACAGTCCAGTAACTCCTCCTTTAAGAAGGGAGCCAATGGGGGTAGGGTACTCTTCTTCAGATTCACTTGACCACCAGTCAAAGCGATCTCACCATTACAATGATACCAGTGGTCTTGCTTCAACACCCCAACTGTCCAGCATTAGTGGAGTGAAGACGGAGGCATCATCTGTAGATGGTTCTCCAAGGTATAGTTCATTATCAGAGACAGATCACTCAAGCAAGCTTTCAGTCAGCAATGCCAGTGATATGGAGACAGAATGGGTAGAACAAGATGAACCAGGTGTCTATATCACTATAAGACTGCTGTCTGGTGGAGTCCGAGAACTAAGGCGTGTCCGGTTTAGCCGAGAGCGGTTTGAAGAATCACGTGCCAGATTGTGGTGGGAGCAGAATCGTGCAAGGATACAAGAACAATATTTGTGA 1080 0.4407 MLTCIACSKQLDSGSLQRQEDDTVGTPSTKHAVKALSAQIKDIALKASSAYKNCKPCSGSSNDNKNRNFSESGTASQSARFHCAYRRTGISNSTPRQWGKEMEARLKALSSGEGTPASVSGRSESIVLMEEDEPKQWVAQVEPGVLITFVSLPQGGNDMKRIRFSRDMFNKWQAQRWWEENYEKITELYNVQRLNQQGVPPQTPSRSEDESSKIESVRDSPVTPPLRREPMGVGYSSSDSLDHQSKRSHHYNDTSGLASTPQLSSISGVKTEASSVDGSPRYSSLSETDHSSKLSVSNASDMETEWVEQDEPGVYITIRLLSGGVRELRRVRFSRERFEESRARLWWEQNRARIQEQYL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte19g00170 359 ProSiteProfiles BRX domain profile. 304 359 IPR013591 -
Pte19g00170 359 MobiDBLite consensus disorder prediction 251 301 - -
Pte19g00170 359 Pfam Transcription factor BRX N-terminal domain 26 57 IPR027988 -
Pte19g00170 359 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 359 IPR044532 -
Pte19g00170 359 Pfam Transcription factor regulating root and shoot growth via Pin3 135 189 IPR013591 -
Pte19g00170 359 Pfam Transcription factor regulating root and shoot growth via Pin3 303 358 IPR013591 -
Pte19g00170 359 ProSiteProfiles BRX domain profile. 135 190 IPR013591 -
Pte19g00170 359 MobiDBLite consensus disorder prediction 195 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte19g00170 Pte-Chr19 1352587 1356453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte19g00170 1 360 Major Intrinsic Protein MIP AT1G31880 47.090 5.37e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte19g00170 - - cave:132186704 551.977